PMK

Atlas summary family PMK.

Lineage Coverage

Detected in 734 of 789 public species; click a lineage to inspect its species list.

Algae

Species Distribution

Related Modules

Pathway Position Map

Pathways are arranged by literature-curated biosynthetic stages and highlight the current enzyme family; branched pathways are grouped by stage rather than forced into one linear reaction chain.

Curated order

Terpenoid pathway 1501 current-family members Bergman et al. 2024; Karunanithi & Zerbe 2019; Zhang et al. 2023; Lu et al. 2023; Moghe et al. 2023

MVA precursor branch

AACT 337 HMGS 2158 HMGR 3794 MVK 1409 PMK 1501 MVD 1588

MEP precursor branch

DXS 4421 DXR 1551 MCT/IspD 1192 CMK/IspE 1150 MDS/IspF 1197 HDS/IspG 1612 HDR/IspH 1720

IPP/DMAPP and prenyl diphosphate extension

IDI 1579 GPPS 135 FPPS 5839 GGPPS 100

Skeleton formation and tailoring

TPS 36208 CYP71 13248 CYP76 46690 UGT 123661 BAHD 149019

Family Gene List

Gene	Species	Protein ID
diospyros_kaki_evm.model.contig1209.65	diospyros_kaki	diospyros_kaki_evm.model.contig1209.65
diospyros_kaki_evm.model.contig1342.123	diospyros_kaki	diospyros_kaki_evm.model.contig1342.123
diospyros_kaki_evm.model.contig5824.127	diospyros_kaki	diospyros_kaki_evm.model.contig5824.127
diospyros_kaki_evm.model.contig5902.7	diospyros_kaki	diospyros_kaki_evm.model.contig5902.7
diospyros_kaki_evm.model.contig5952.132	diospyros_kaki	diospyros_kaki_evm.model.contig5952.132
diospyros_kaki_evm.model.contig6159.168	diospyros_kaki	diospyros_kaki_evm.model.contig6159.168
diospyros_kaki_evm.model.contig6176.148	diospyros_kaki	diospyros_kaki_evm.model.contig6176.148
DlotDlo_pri0609F.10455110.1	diospyros_lotus	DlotDlo_pri0609F.10455110.1
DlotDlo_pri0609F.10455120.1	diospyros_lotus	DlotDlo_pri0609F.10455120.1
DlotDlo_pri0999F.10486890.1	diospyros_lotus	DlotDlo_pri0999F.10486890.1
Dole08G0005590.1	diospyros_oleifera	Dole08G0005590.1
DIPfulscaffold_30056830	diphyscium_fulvifolium	DIPfulscaffold_30056830
DIPfulscaffold_50114540	diphyscium_fulvifolium	DIPfulscaffold_50114540
Dcolcontig_1080004110	distichophyllum_collenchymatosom	Dcolcontig_1080004110
Dcolcontig_1080004110	distichophyllum_collenchymatosum	Dcolcontig_1080004110
dorcoceras_hygrometricum_KZV15147.1	dorcoceras_hygrometricum	dorcoceras_hygrometricum_KZV15147.1
dorcoceras_hygrometricum_KZV42890.1	dorcoceras_hygrometricum	dorcoceras_hygrometricum_KZV42890.1
dorcoceras_hygrometricum_KZV46462.1	dorcoceras_hygrometricum	dorcoceras_hygrometricum_KZV46462.1
Ddruscaffold1270013650	dryas_drummondii	Ddruscaffold1270013650
Ddruscaffold340139360	dryas_drummondii	Ddruscaffold340139360
XP_022736386.1	durio_zibethinus	XP_022736386.1
XP_022736387.1	durio_zibethinus	XP_022736387.1
XP_022736388.1	durio_zibethinus	XP_022736388.1
XP_022743828.1	durio_zibethinus	XP_022743828.1
XP_022744362.1	durio_zibethinus	XP_022744362.1
XP_022756694.1	durio_zibethinus	XP_022756694.1
XP_022756701.1	durio_zibethinus	XP_022756701.1
XP_022775847.1	durio_zibethinus	XP_022775847.1
echinochloa_oryzicola_GWHPBDNS004731	echinochloa_oryzicola	echinochloa_oryzicola_GWHPBDNS004731
echinochloa_oryzicola_GWHPBDNS037635	echinochloa_oryzicola	echinochloa_oryzicola_GWHPBDNS037635