Species

Browse public species by taxonomic group. Each species page shows annotation coverage across pathways and enzyme families.

Lineage Filter

Click a lineage to restrict the species list to that group and continue drilling down from the homepage lineage chart.

All Species Algae (174) Bryophytes (750) Lycophytes/Ferns (24) Gymnosperms (36) Basal angiosperms (78) Monocots (702) Eudicots (2970)

Bryophytes (125)

Acrobolbus urvilleanus (acrobolbus_urvilleanus)

794 candidate genes

67 families

6 pathways

Aerobryopsis subdivergens (aerobryopsis_subdivergens)

734 candidate genes

70 families

6 pathways

Andreaea rupestris (andreaea_rupestris)

684 candidate genes

75 families

6 pathways

Andreaea wilsonii (andreaea_wilsonii)

413 candidate genes

70 families

6 pathways

Andreaeobryum macrosporum (andreaeobryum_macrosporum)

453 candidate genes

66 families

6 pathways

Anomodon attenuatus (anomodon_attenuatus)

665 candidate genes

69 families

6 pathways

Anthoceros agrestis Bonn (anthoceros_agrestis_bonn)

648 candidate genes

73 families

6 pathways

Anthoceros agrestis Oxford (anthoceros_agrestis_oxford)

1326 candidate genes

74 families

6 pathways

Anthoceros angustus (anthoceros_angustus)

439 candidate genes

68 families

6 pathways

Anthoceros punctatus (anthoceros_punctatus)

910 candidate genes

69 families

6 pathways

Archidium alternifolium (archidium_alternifolium)

891 candidate genes

75 families

6 pathways

Atrichum angustatum (atrichum_angustatum)

627 candidate genes

68 families

6 pathways

Aulacomnium androgynum (aulacomnium_androgynum)

602 candidate genes

68 families

6 pathways

Aulacomnium palustre (aulacomnium_palustre)

619 candidate genes

72 families

6 pathways

Aulacomnium turgidum (aulacomnium_turgidum)

700 candidate genes

73 families

6 pathways

Barbula amplexifolia (barbula_amplexifolia)

691 candidate genes

74 families

6 pathways

Bartramia ithyphylla (bartramia_ithyphylla)

652 candidate genes

75 families

6 pathways

Bazzania tridens (bazzania_tridens)

679 candidate genes

75 families

6 pathways

Blasia pusilla (blasia_pusilla)

549 candidate genes

68 families

6 pathways

Brachythecium laetum (brachythecium_laetum)

668 candidate genes

71 families

6 pathways

Brachythecium roeteanum (brachythecium_roeteanum)

664 candidate genes

70 families

6 pathways

Bryhnia novae-angliae (bryhnia_novae_angliae)

708 candidate genes

74 families

6 pathways

Bryoandersonia illecebra (bryoandersonia_illecebra)

691 candidate genes

72 families

6 pathways

Bryoxiphium norvegicum (bryoxiphium_norvegicum)

778 candidate genes

71 families

6 pathways

Bryum knowltonii (bryum_knowltonii)

1560 candidate genes

74 families

6 pathways

Buxbaumia aphylla (buxbaumia_aphylla)

751 candidate genes

71 families

6 pathways

Calliergon cordifolium (calliergon_cordifolium)

877 candidate genes

78 families

6 pathways

Calliergonella cuspidata (calliergonella_cuspidata)

703 candidate genes

75 families

6 pathways

Calohypnum plumiforme (calohypnum_plumiforme)

524 candidate genes

69 families

6 pathways

Catagonium nitens (catagonium_nitens)

630 candidate genes

73 families

6 pathways

Chorisodontium acidophyllum (chorisodontium_acidophyllum)

651 candidate genes

69 families

6 pathways

Chorisodontium aciphyllum (chorisodontium_aciphyllum)

658 candidate genes

69 families

6 pathways

Climacium americanum (climacium_americanum)

648 candidate genes

70 families

6 pathways

Conocephalum conicum (conocephalum_conicum)

647 candidate genes

72 families

6 pathways

Cratoneuron filicinum (cratoneuron_filicinum)

684 candidate genes

75 families

6 pathways

Cyathodium cavernarum (cyathodium_cavernarum)

634 candidate genes

74 families

6 pathways

Dicranoloma chilense (dicranoloma_chilense)

607 candidate genes

70 families

6 pathways

Dicranum fulvum (dicranum_fulvum)

744 candidate genes

72 families

6 pathways

Diphyscium fulvifolium (diphyscium_fulvifolium)

511 candidate genes

69 families

6 pathways

Distichophyllum collenchymatosom (distichophyllum_collenchymatosom)

551 candidate genes

69 families

6 pathways

Distichophyllum collenchymatosum (distichophyllum_collenchymatosum)

551 candidate genes

69 families

6 pathways

Ectropothecium obtusulum (ectropothecium_obtusulum)

643 candidate genes

74 families

6 pathways

Fissidens javanicus (fissidens_javanicus)

686 candidate genes

70 families

6 pathways

Fontinalis (fontinalis)

475 candidate genes

68 families

6 pathways

Fontinalis antipyretica (fontinalis_antipyretica)

524 candidate genes

70 families

6 pathways

Fontinalis sullivantii (fontinalis_sullivantii)

476 candidate genes

68 families

6 pathways

Fossombronia (fossombronia)

715 candidate genes

75 families

6 pathways

Frullania moniliata (frullania_moniliata)

633 candidate genes

71 families

6 pathways

Funaria hygrometrica (funaria_hygrometrica)

648 candidate genes

67 families

6 pathways

Gackstroemia (gackstroemia)

640 candidate genes

70 families

6 pathways

Gackstroemia magellanica (gackstroemia_magellanica)

644 candidate genes

70 families

6 pathways

Gollania philippinensis (gollania_philippinensis)

632 candidate genes

73 families

6 pathways

Grimmia obtusifolia (grimmia_obtusifolia)

634 candidate genes

70 families

6 pathways

Haplomitrium (haplomitrium)

679 candidate genes

72 families

6 pathways

Hedwigia ciliata (hedwigia_ciliata)

627 candidate genes

76 families

6 pathways

Homaliodendron scalpellifolium (homaliodendron_scalpellifolium)

784 candidate genes

74 families

6 pathways

Hygroamblystegium varium (hygroamblystegium_varium)

1226 candidate genes

75 families

6 pathways

Hygrohypnum luridum (hygrohypnum_luridum)

644 candidate genes

71 families

6 pathways

Hypnum curvifolium (hypnum_curvifolium)

644 candidate genes

71 families

6 pathways

Hypopterygium elatum (hypopterygium_elatum)

529 candidate genes

71 families

6 pathways

Hypopterygium japonicum (hypopterygium_japonicum)

734 candidate genes

69 families

6 pathways

Jamesoniella autumnalis (jamesoniella_autumnalis)

693 candidate genes

73 families

6 pathways

Jungermannia erectum (jungermannia_erectum)

509 candidate genes

67 families

6 pathways

Kindbergia praelongum (kindbergia_praelongum)

848 candidate genes

74 families

6 pathways

Lepidozia reptans (lepidozia_reptans)

633 candidate genes

72 families

6 pathways

Leptotheca gaudichaudii (leptotheca_gaudichaudii)

657 candidate genes

74 families

6 pathways

Leucobryum (leucobryum)

727 candidate genes

74 families

6 pathways

Leucobryum albidum (leucobryum_albidum)

729 candidate genes

74 families

6 pathways

Leucobryum bowringii (leucobryum_bowringii)

694 candidate genes

71 families

6 pathways

Marchantia polymorpha (marchantia_polymorpha)

908 candidate genes

71 families

6 pathways

Mesoptychia sp (mesoptychia_sp)

849 candidate genes

72 families

6 pathways

Metzgeria hamata (metzgeria_hamata)

585 candidate genes

73 families

6 pathways

Mnium hornum (mnium_hornum)

809 candidate genes

74 families

6 pathways

Noteroclada confluens (noteroclada_confluens)

1374 candidate genes

82 families

6 pathways

Odontoschisma sphagni (odontoschisma_sphagni)

694 candidate genes

73 families

6 pathways

Orthotrichum anomalum (orthotrichum_anomalum)

487 candidate genes

71 families

6 pathways

Pallavicinia ambigua (pallavicinia_ambigua)

762 candidate genes

79 families

6 pathways

Paraleucobryum enerve (paraleucobryum_enerve)

689 candidate genes

73 families

6 pathways

Phaeoceros laevis (phaeoceros_laevis)

447 candidate genes

69 families

6 pathways

Philonotis turneriana (philonotis_turneriana)

732 candidate genes

75 families

6 pathways

Physcomitrella patens (physcomitrella_patens)

1885 candidate genes

72 families

6 pathways

Plagiochasma appendiculatum (plagiochasma_appendiculatum)

633 candidate genes

70 families

6 pathways

Plagiochila semidecurrens (plagiochila_semidecurrens)

683 candidate genes

71 families

6 pathways

Plagiomnium ciliare (plagiomnium_ciliare)

775 candidate genes

74 families

6 pathways

Pleuridium subulatum (pleuridium_subulatum)

726 candidate genes

77 families

6 pathways

Pleurozia purpurea (pleurozia_purpurea)

618 candidate genes

69 families

6 pathways

Plicanthus hirtellus (plicanthus_hirtellus)

705 candidate genes

72 families

6 pathways

Pogonatum microstomum (pogonatum_microstomum)

602 candidate genes

68 families

6 pathways

Pogonatum subfuscatum (pogonatum_subfuscatum)

601 candidate genes

74 families

6 pathways

Polytrichastrum alpinum (polytrichastrum_alpinum)

607 candidate genes

66 families

6 pathways

Polytrichastrum ohioense (polytrichastrum_ohioense)

1044 candidate genes

77 families

6 pathways

Polytrichum commune (polytrichum_commune)

606 candidate genes

68 families

6 pathways

Polytrichum strictum (polytrichum_strictum)

605 candidate genes

70 families

6 pathways

Porella caespitans var.nipponica (porella_caespitans_var_nipponica)

550 candidate genes

72 families

6 pathways

Porella chinensis (porella_chinensis)

670 candidate genes

74 families

6 pathways

Porella platyphylla (porella_platyphylla)

572 candidate genes

75 families

6 pathways

Pseudobryum cinclidioides (pseudobryum_cinclidioides)

658 candidate genes

74 families

6 pathways

Ptilidium pulcherrimum (ptilidium_pulcherrimum)

583 candidate genes

73 families

6 pathways

Ptychomitrium wilsonii (ptychomitrium_wilsonii)

572 candidate genes

70 families

6 pathways

Pyrrhobryum spiniforme (pyrrhobryum_spiniforme)

757 candidate genes

69 families

6 pathways

Racomitrium nitidulum (racomitrium_nitidulum)

688 candidate genes

70 families

6 pathways

Raddia distichophylla (raddia_distichophylla)

1293 candidate genes

78 families

6 pathways

Raddia guianensis (raddia_guianensis)

1868 candidate genes

83 families

6 pathways

Regmatodon serrulatus (regmatodon_serrulatus)

620 candidate genes

77 families

6 pathways

Ricciocarpus natans (ricciocarpus_natans)

578 candidate genes

70 families

6 pathways

Sanionia uncinata (sanionia_uncinata)

Scapania nepalensis (scapania_nepalensis)

716 candidate genes

75 families

6 pathways

Schistidium cupulare (schistidium_cupulare)

552 candidate genes

69 families

6 pathways

Schistostega pennata (schistostega_pennata)

528 candidate genes

74 families

6 pathways

Sphaerocarpos donnellii (sphaerocarpos_donnellii)

687 candidate genes

73 families

6 pathways

Sphagnum girgensohnii (sphagnum_girgensohnii)

917 candidate genes

77 families

6 pathways

Sphagnum palustre (sphagnum_palustre)

1110 candidate genes

74 families

6 pathways

Spirogloea muscicola (spirogloea_muscicola)

434 candidate genes

54 families

6 pathways

Syntrichia caninervis (syntrichia_caninervis)

634 candidate genes

74 families

6 pathways

Syntrichia ruralis (syntrichia_ruralis)

1236 candidate genes

72 families

6 pathways

Tetralophozia filiformis (tetralophozia_filiformis)

661 candidate genes

73 families

6 pathways

Tetraphis pellucida (tetraphis_pellucida)

693 candidate genes

73 families

6 pathways

Thamnobryum sandei (thamnobryum_sandei)

1313 candidate genes

80 families

6 pathways

Timmia megapolitana (timmia_megapolitana)

Tritomaria exsectiformis (tritomaria_exsectiformis)

593 candidate genes

74 families

6 pathways

Trocholejeunea sandvicensis (trocholejeunea_sandvicensis)

526 candidate genes

71 families

6 pathways

Ulota hutchinsiae (ulota_hutchinsiae)

557 candidate genes

71 families

6 pathways

Vetaforma dusenii (vetaforma_dusenii)

734 candidate genes

79 families

6 pathways