PlantSME Plant secondary metabolism enzyme database

Plagiochila semidecurrens (plagiochila_semidecurrens)

Imported from atlas release summary for Plagiochila semidecurrens.

683
Candidate Genes
101
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (93)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 188 12 POD (84) View species results
Terpenoid pathway 169 17 BAHD (62) View species results
Alkaloid pathway 132 18 NMT (21) View species results
Flavonoid pathway 85 10 UFGT (42) View species results
Rosmarinic acid pathway 72 7 C4H (35) View species results
Steroid pathway 37 13 CAS (9) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 633 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 144 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Gene Pathway Family Confidence Status
Psem1680009700 Alkaloid 16OMT medium borderline
Psem3950640086050 Alkaloid 16OMT medium borderline
Psem4112390116670 Alkaloid 16OMT medium borderline
Psem4399950193180 Alkaloid 16OMT low borderline
Psem4447460245310 Alkaloid 16OMT low borderline
Psem4455480256870 Alkaloid 16OMT medium borderline
Psem4689030287130 Alkaloid 16OMT medium borderline
Psem4689050287200 Alkaloid 16OMT medium borderline
Psem4458320260420 Alkaloid 6OMT_4OMT_SOMT low borderline
Psem10690002760 Alkaloid 7DLGT low borderline
Psem2880020018490 Alkaloid 7DLGT medium pass
Psem2910023840 Alkaloid 7DLGT low borderline
Psem4165680120590 Alkaloid 7DLGT medium pass
Psem4237970129710 Alkaloid 7DLGT low borderline
Psem4240110130230 Alkaloid 7DLGT low borderline
Psem4275840137180 Alkaloid 7DLGT low borderline
Psem4286540139440 Alkaloid 7DLGT low borderline
Psem4324540150440 Alkaloid 7DLGT medium pass
Psem4346660159700 Alkaloid 7DLGT low borderline
Psem4354120163640 Alkaloid 7DLGT high pass
Psem4355400164340 Alkaloid 7DLGT low borderline
Psem4355400164350 Alkaloid 7DLGT low borderline
Psem4361150167370 Alkaloid 7DLGT low borderline
Psem4361970167730 Alkaloid 7DLGT medium pass
Psem4362010167740 Alkaloid 7DLGT low borderline
Psem4365000169230 Alkaloid 7DLGT low borderline
Psem4367170169980 Alkaloid 7DLGT low borderline
Psem4379950178260 Alkaloid 7DLGT low borderline
Psem4380030178330 Alkaloid 7DLGT low borderline
Psem4384310180680 Alkaloid 7DLGT medium pass
Psem4386090182130 Alkaloid 7DLGT low borderline
Psem4391860185990 Alkaloid 7DLGT medium pass
Psem4401890194530 Alkaloid 7DLGT low borderline
Psem4407130199360 Alkaloid 7DLGT low borderline
Psem4408890200910 Alkaloid 7DLGT low borderline
Psem4413820206090 Alkaloid 7DLGT low borderline
Psem4413850206180 Alkaloid 7DLGT low borderline
Psem4418860211120 Alkaloid 7DLGT medium pass
Psem4419010211280 Alkaloid 7DLGT low borderline
Psem4439660234360 Alkaloid 7DLGT low borderline
Psem4441920237560 Alkaloid 7DLGT medium pass
Psem4446220243670 Alkaloid 7DLGT low borderline
Psem4447250244960 Alkaloid 7DLGT low borderline
Psem4449630248780 Alkaloid 7DLGT low borderline
Psem4453360254170 Alkaloid 7DLGT medium pass
Psem4461450265120 Alkaloid 7DLGT low borderline
Psem4463100267640 Alkaloid 7DLGT low borderline
Psem4469070274950 Alkaloid 7DLGT medium pass
Psem4511680277140 Alkaloid 7DLGT medium pass
Psem4511700277160 Alkaloid 7DLGT medium pass