PlantSME Plant secondary metabolism enzyme database

Plagiochila semidecurrens (plagiochila_semidecurrens)

Imported from atlas release summary for Plagiochila semidecurrens.

683
Candidate Genes
101
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (93)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 188 12 POD (84) View species results
Terpenoid pathway 169 17 BAHD (62) View species results
Alkaloid pathway 132 18 NMT (21) View species results
Flavonoid pathway 85 10 UFGT (42) View species results
Rosmarinic acid pathway 72 7 C4H (35) View species results
Steroid pathway 37 13 CAS (9) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 633 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 144 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: G8O/G8H
Reset
Gene Pathway Family Confidence Status
Psem3455700050430 Alkaloid G8O/G8H medium borderline
Psem3786210063960 Alkaloid G8O/G8H medium borderline
Psem3859390073750 Alkaloid G8O/G8H medium borderline
Psem3948770085190 Alkaloid G8O/G8H medium borderline
Psem4079200107020 Alkaloid G8O/G8H medium borderline
Psem4109070115530 Alkaloid G8O/G8H medium borderline
Psem4140880119370 Alkaloid G8O/G8H medium borderline
Psem4174680121690 Alkaloid G8O/G8H medium borderline
Psem4200200125030 Alkaloid G8O/G8H low borderline
Psem4213300126160 Alkaloid G8O/G8H low borderline
Psem4258290133310 Alkaloid G8O/G8H medium borderline
Psem4330110152280 Alkaloid G8O/G8H low borderline
Psem4353420163290 Alkaloid G8O/G8H medium borderline
Psem4395550189430 Alkaloid G8O/G8H low borderline
Psem4399480192810 Alkaloid G8O/G8H medium borderline
Psem4407100199240 Alkaloid G8O/G8H medium borderline
Psem4414070206470 Alkaloid G8O/G8H low borderline
Psem4437850232180 Alkaloid G8O/G8H medium borderline
Psem4440390235510 Alkaloid G8O/G8H medium borderline
Psem4449720248870 Alkaloid G8O/G8H medium borderline
Psem4656680282310 Alkaloid G8O/G8H medium borderline
Psem6710303680 Alkaloid G8O/G8H medium borderline
Psem7580306490 Alkaloid G8O/G8H medium borderline