PlantSME Plant secondary metabolism enzyme database

Plagiochila semidecurrens (plagiochila_semidecurrens)

Imported from atlas release summary for Plagiochila semidecurrens.

683
Candidate Genes
101
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (93)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 188 12 POD (84) View species results
Terpenoid pathway 169 17 BAHD (62) View species results
Alkaloid pathway 132 18 NMT (21) View species results
Flavonoid pathway 85 10 UFGT (42) View species results
Rosmarinic acid pathway 72 7 C4H (35) View species results
Steroid pathway 37 13 CAS (9) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 633 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 144 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CSE
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Gene Pathway Family Confidence Status Best Target
Psem4114930117390 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Psem4371890172820 Phenylpropanoid CSE medium pass CSE__00002__sp_Q9C942_CSE_ARATH
Psem4373950174430 Phenylpropanoid CSE low borderline CSE__00001__sp_P0DO76_4HBS_VANPL
Psem4374370174670 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Psem4397050190930 Phenylpropanoid CSE medium pass CSE__00002__sp_Q9C942_CSE_ARATH
Psem4411630203740 Phenylpropanoid CSE medium pass CSE__00002__sp_Q9C942_CSE_ARATH
Psem4413830206100 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Psem4421180213520 Phenylpropanoid CSE medium pass CSE__00002__sp_Q9C942_CSE_ARATH
Psem4423020215310 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Psem4435150228990 Phenylpropanoid CSE medium pass CSE__00002__sp_Q9C942_CSE_ARATH
Psem4440680236010 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Psem4444000240270 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Psem4446590244170 Phenylpropanoid CSE medium pass CSE__00002__sp_Q9C942_CSE_ARATH
Psem4452430252680 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Psem4467160272810 Phenylpropanoid CSE medium pass CSE__00002__sp_Q9C942_CSE_ARATH