PlantSME Plant secondary metabolism enzyme database

Plagiochila semidecurrens (plagiochila_semidecurrens)

Imported from atlas release summary for Plagiochila semidecurrens.

683
Candidate Genes
101
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (93)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 188 12 POD (84) View species results
Terpenoid pathway 169 17 BAHD (62) View species results
Alkaloid pathway 132 18 NMT (21) View species results
Flavonoid pathway 85 10 UFGT (42) View species results
Rosmarinic acid pathway 72 7 C4H (35) View species results
Steroid pathway 37 13 CAS (9) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 633 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 144 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: IFR
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Gene Pathway Family Confidence Status
Psem1430008640 Flavonoid IFR medium pass
Psem1450008680 Flavonoid IFR low borderline
Psem3957420088170 Flavonoid IFR low borderline
Psem4030680096190 Flavonoid IFR low borderline
Psem4149130119550 Flavonoid IFR high pass
Psem4202440125340 Flavonoid IFR low borderline
Psem4233360129200 Flavonoid IFR low borderline
Psem4279400137790 Flavonoid IFR low borderline
Psem4315720147420 Flavonoid IFR low borderline
Psem4337600155470 Flavonoid IFR high pass
Psem4362730168080 Flavonoid IFR high pass
Psem4367190169990 Flavonoid IFR low borderline
Psem4392790186930 Flavonoid IFR low borderline
Psem4412520204620 Flavonoid IFR low borderline
Psem4412720204780 Flavonoid IFR low borderline
Psem4414140206560 Flavonoid IFR high pass
Psem4418080210310 Flavonoid IFR low borderline
Psem4426150218450 Flavonoid IFR low borderline
Psem4434310228230 Flavonoid IFR low borderline
Psem4435780229820 Flavonoid IFR low borderline
Psem4437230231480 Flavonoid IFR low borderline
Psem4437260231540 Flavonoid IFR low borderline
Psem4448740247300 Flavonoid IFR low borderline
Psem4450930250150 Flavonoid IFR low borderline
Psem4452300252380 Flavonoid IFR low borderline
Psem4453440254300 Flavonoid IFR low borderline
Psem4454940256150 Flavonoid IFR low borderline
Psem4455760257220 Flavonoid IFR low borderline
Psem4458520260890 Flavonoid IFR low borderline
Psem4460120263180 Flavonoid IFR low borderline
Psem4460230263460 Flavonoid IFR low borderline
Psem4610620281090 Flavonoid IFR medium pass
Psem4610630281140 Flavonoid IFR medium pass
Psem4675410283780 Flavonoid IFR high pass
Psem4675420283790 Flavonoid IFR high pass
Psem4709630292450 Flavonoid IFR low borderline
Psem4709640292460 Flavonoid IFR low borderline