PlantSME Plant secondary metabolism enzyme database

Plagiochila semidecurrens (plagiochila_semidecurrens)

Imported from atlas release summary for Plagiochila semidecurrens.

683
Candidate Genes
101
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (93)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 188 12 POD (84) View species results
Terpenoid pathway 169 17 BAHD (62) View species results
Alkaloid pathway 132 18 NMT (21) View species results
Flavonoid pathway 85 10 UFGT (42) View species results
Rosmarinic acid pathway 72 7 C4H (35) View species results
Steroid pathway 37 13 CAS (9) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 633 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 144 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: F3H
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Gene Pathway Family Confidence Status
Psem4087140109440 Flavonoid F3H low borderline
Psem4125940118550 Flavonoid F3H medium borderline
Psem4194410123950 Flavonoid F3H medium borderline
Psem4237850129680 Flavonoid F3H medium borderline
Psem4259920133730 Flavonoid F3H medium borderline
Psem4272550136540 Flavonoid F3H medium borderline
Psem4300830143240 Flavonoid F3H medium borderline
Psem4322240149690 Flavonoid F3H low borderline
Psem4327140151380 Flavonoid F3H medium borderline
Psem4340540156610 Flavonoid F3H medium borderline
Psem4348480160580 Flavonoid F3H medium borderline
Psem4348850160710 Flavonoid F3H medium borderline
Psem4355530164420 Flavonoid F3H low borderline
Psem4356120164810 Flavonoid F3H medium borderline
Psem4360960167320 Flavonoid F3H medium borderline
Psem4381620179020 Flavonoid F3H medium borderline
Psem4416040208630 Flavonoid F3H medium pass
Psem4419200211460 Flavonoid F3H low borderline
Psem4420370212850 Flavonoid F3H medium borderline
Psem4421230213610 Flavonoid F3H medium pass
Psem4424180216880 Flavonoid F3H medium borderline
Psem4425790218150 Flavonoid F3H medium borderline
Psem4432860226110 Flavonoid F3H medium borderline
Psem4435830229890 Flavonoid F3H medium borderline
Psem4438920233470 Flavonoid F3H medium pass
Psem4440730236080 Flavonoid F3H medium borderline
Psem4445710242810 Flavonoid F3H low borderline
Psem4449530248660 Flavonoid F3H medium borderline
Psem4455600257010 Flavonoid F3H low borderline
Psem4679000284630 Flavonoid F3H medium borderline
Psem4679010284650 Flavonoid F3H medium borderline
Psem4718270295210 Flavonoid F3H medium borderline
Psem4718280295250 Flavonoid F3H medium borderline
Psem6740303800 Flavonoid F3H medium borderline