PlantSME Plant secondary metabolism enzyme database

Plagiochila semidecurrens (plagiochila_semidecurrens)

Imported from atlas release summary for Plagiochila semidecurrens.

683
Candidate Genes
101
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (93)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 188 12 POD (84) View species results
Terpenoid pathway 169 17 BAHD (62) View species results
Alkaloid pathway 132 18 NMT (21) View species results
Flavonoid pathway 85 10 UFGT (42) View species results
Rosmarinic acid pathway 72 7 C4H (35) View species results
Steroid pathway 37 13 CAS (9) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 633 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 144 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: F3'H/CYP75B
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Gene Pathway Family Confidence Status
Psem3455700050430 Flavonoid F3'H/CYP75B medium borderline
Psem3560530057750 Flavonoid F3'H/CYP75B low borderline
Psem3786210063960 Flavonoid F3'H/CYP75B low borderline
Psem3948770085190 Flavonoid F3'H/CYP75B medium borderline
Psem3959470089070 Flavonoid F3'H/CYP75B medium borderline
Psem4036980097200 Flavonoid F3'H/CYP75B medium borderline
Psem4079200107020 Flavonoid F3'H/CYP75B medium borderline
Psem4174680121690 Flavonoid F3'H/CYP75B medium borderline
Psem4194570123970 Flavonoid F3'H/CYP75B medium borderline
Psem4194840124040 Flavonoid F3'H/CYP75B low borderline
Psem4272920136610 Flavonoid F3'H/CYP75B medium borderline
Psem4277360137360 Flavonoid F3'H/CYP75B medium borderline
Psem4292040141080 Flavonoid F3'H/CYP75B low borderline
Psem4373580174090 Flavonoid F3'H/CYP75B medium borderline
Psem4380080178410 Flavonoid F3'H/CYP75B medium borderline
Psem4393680187680 Flavonoid F3'H/CYP75B medium borderline
Psem4400410193540 Flavonoid F3'H/CYP75B medium borderline
Psem4407100199240 Flavonoid F3'H/CYP75B medium borderline
Psem4409340201460 Flavonoid F3'H/CYP75B low borderline
Psem4414070206460 Flavonoid F3'H/CYP75B medium borderline
Psem4421230213600 Flavonoid F3'H/CYP75B low borderline
Psem4427800220610 Flavonoid F3'H/CYP75B medium borderline
Psem4430780223700 Flavonoid F3'H/CYP75B medium borderline
Psem4438050232480 Flavonoid F3'H/CYP75B low borderline
Psem4440390235510 Flavonoid F3'H/CYP75B medium borderline
Psem4460300263620 Flavonoid F3'H/CYP75B medium borderline
Psem4656680282310 Flavonoid F3'H/CYP75B medium borderline
Psem4723260296290 Flavonoid F3'H/CYP75B medium borderline
Psem4723270296310 Flavonoid F3'H/CYP75B medium borderline
Psem7520306210 Flavonoid F3'H/CYP75B medium borderline
Psem7580306490 Flavonoid F3'H/CYP75B medium borderline