PlantSME Plant secondary metabolism enzyme database

Plagiochila semidecurrens (plagiochila_semidecurrens)

Imported from atlas release summary for Plagiochila semidecurrens.

683
Candidate Genes
101
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (93)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 188 12 POD (84) View species results
Terpenoid pathway 169 17 BAHD (62) View species results
Alkaloid pathway 132 18 NMT (21) View species results
Flavonoid pathway 85 10 UFGT (42) View species results
Rosmarinic acid pathway 72 7 C4H (35) View species results
Steroid pathway 37 13 CAS (9) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 633 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 144 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Terpenoid pathway
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Gene Pathway Family Confidence Status
Psem4332720153330 Terpenoid AACT medium borderline
Psem4386930182880 Terpenoid AACT low borderline
Psem4440820236260 Terpenoid AACT low borderline
Psem4443330239550 Terpenoid AACT medium borderline
Psem4467680273420 Terpenoid AACT medium borderline
Psem4536550278160 Terpenoid AACT medium borderline
Psem4536560278170 Terpenoid AACT medium borderline
Psem4684070286240 Terpenoid AACT medium borderline
Psem4684080286310 Terpenoid AACT medium borderline
Psem10390001530 Terpenoid BAHD low borderline
Psem11660007150 Terpenoid BAHD low borderline
Psem2360012320 Terpenoid BAHD low borderline
Psem3231340035800 Terpenoid BAHD medium pass
Psem3305010041760 Terpenoid BAHD medium pass
Psem3459960052000 Terpenoid BAHD medium pass
Psem3505010053830 Terpenoid BAHD medium pass
Psem3525550054980 Terpenoid BAHD low borderline
Psem3651150060650 Terpenoid BAHD medium pass
Psem3878220075740 Terpenoid BAHD low borderline
Psem3941730083130 Terpenoid BAHD medium pass
Psem3944860084640 Terpenoid BAHD low borderline
Psem4115430117550 Terpenoid BAHD medium pass
Psem4162770120430 Terpenoid BAHD low borderline
Psem4186620122620 Terpenoid BAHD medium pass
Psem4224290127630 Terpenoid BAHD medium pass
Psem4228150128400 Terpenoid BAHD low borderline
Psem4232580129130 Terpenoid BAHD medium pass
Psem4241620130400 Terpenoid BAHD medium pass
Psem4245970131490 Terpenoid BAHD low borderline
Psem4248100131960 Terpenoid BAHD medium pass
Psem4278170137520 Terpenoid BAHD medium pass
Psem4296280142030 Terpenoid BAHD medium pass
Psem4303230144020 Terpenoid BAHD medium pass
Psem4314800147080 Terpenoid BAHD medium pass
Psem4321710149560 Terpenoid BAHD low borderline
Psem4342390157410 Terpenoid BAHD medium pass
Psem4346020159240 Terpenoid BAHD medium pass
Psem4352890163030 Terpenoid BAHD medium pass
Psem4363570168350 Terpenoid BAHD low borderline
Psem4364010168670 Terpenoid BAHD medium pass
Psem4369610171460 Terpenoid BAHD medium pass
Psem4375780175560 Terpenoid BAHD medium pass
Psem4386530182470 Terpenoid BAHD low borderline
Psem4393540187550 Terpenoid BAHD low borderline
Psem4397440191340 Terpenoid BAHD medium pass
Psem4398270192060 Terpenoid BAHD medium pass
Psem4401700194310 Terpenoid BAHD medium pass
Psem4402940195480 Terpenoid BAHD low borderline
Psem4404520196900 Terpenoid BAHD medium pass
Psem4406500198880 Terpenoid BAHD medium pass