PlantSME Plant secondary metabolism enzyme database

Calliergonella cuspidata (calliergonella_cuspidata)

Imported from atlas release summary for Calliergonella cuspidata.

703
Candidate Genes
102
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (94)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 176 11 POD (86) View species results
Terpenoid pathway 167 19 BAHD (65) View species results
Alkaloid pathway 137 18 PYKS (29) View species results
Flavonoid pathway 107 12 CHS (29) View species results
Rosmarinic acid pathway 76 7 PAL (26) View species results
Steroid pathway 40 12 CAS (14) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 739 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 108 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Gene Pathway Family Confidence Status
Ccusscaffold_100027420 Alkaloid 16OMT medium borderline
Ccusscaffold_100027430 Alkaloid 16OMT medium borderline
Ccusscaffold_100027450 Alkaloid 16OMT medium borderline
Ccusscaffold_100027480 Alkaloid 16OMT medium borderline
Ccusscaffold_110052800 Alkaloid 16OMT medium borderline
Ccusscaffold_40102640 Alkaloid 16OMT medium borderline
Ccusscaffold_90263390 Alkaloid 16OMT medium borderline
Ccusscaffold_10010610 Alkaloid 6OMT_4OMT_SOMT low borderline
Ccusscaffold_110054010 Alkaloid 6OMT_4OMT_SOMT medium borderline
Ccusscaffold_60184330 Alkaloid 6OMT_4OMT_SOMT low borderline
Ccusscaffold_100021030 Alkaloid 7DLGT low borderline
Ccusscaffold_100021040 Alkaloid 7DLGT medium pass
Ccusscaffold_100031710 Alkaloid 7DLGT medium pass
Ccusscaffold_100031750 Alkaloid 7DLGT medium pass
Ccusscaffold_100036810 Alkaloid 7DLGT low borderline
Ccusscaffold_100037760 Alkaloid 7DLGT low borderline
Ccusscaffold_10005780 Alkaloid 7DLGT medium pass
Ccusscaffold_10005790 Alkaloid 7DLGT high pass
Ccusscaffold_10005800 Alkaloid 7DLGT medium pass
Ccusscaffold_10005820 Alkaloid 7DLGT high pass
Ccusscaffold_10005830 Alkaloid 7DLGT medium pass
Ccusscaffold_10014510 Alkaloid 7DLGT low borderline
Ccusscaffold_110052570 Alkaloid 7DLGT low borderline
Ccusscaffold_40088510 Alkaloid 7DLGT low borderline
Ccusscaffold_40096780 Alkaloid 7DLGT medium pass
Ccusscaffold_40103640 Alkaloid 7DLGT low borderline
Ccusscaffold_50114100 Alkaloid 7DLGT low borderline
Ccusscaffold_50142400 Alkaloid 7DLGT low borderline
Ccusscaffold_50148250 Alkaloid 7DLGT medium pass
Ccusscaffold_60187890 Alkaloid 7DLGT medium pass
Ccusscaffold_60187900 Alkaloid 7DLGT medium pass
Ccusscaffold_60194310 Alkaloid 7DLGT low borderline
Ccusscaffold_90238080 Alkaloid 7DLGT low borderline
Ccusscaffold_90252930 Alkaloid 7DLGT low borderline
Ccusscaffold_90268600 Alkaloid 7DLGT medium pass
Ccusscaffold_90268620 Alkaloid 7DLGT low borderline
Ccusscaffold_90269060 Alkaloid 7DLGT low borderline
Ccusscaffold_100019390 Alkaloid 7DLH low borderline
Ccusscaffold_100031210 Alkaloid 7DLH medium borderline
Ccusscaffold_10008080 Alkaloid 7DLH low borderline
Ccusscaffold_10016000 Alkaloid 7DLH medium borderline
Ccusscaffold_110052640 Alkaloid 7DLH medium borderline
Ccusscaffold_20079440 Alkaloid 7DLH medium borderline
Ccusscaffold_50131920 Alkaloid 7DLH medium borderline
Ccusscaffold_60161080 Alkaloid 7DLH medium borderline
Ccusscaffold_60179620 Alkaloid 7DLH medium borderline
Ccusscaffold_60179630 Alkaloid 7DLH medium borderline
Ccusscaffold_60179710 Alkaloid 7DLH medium borderline
Ccusscaffold_60179740 Alkaloid 7DLH medium borderline
Ccusscaffold_60192810 Alkaloid 7DLH medium borderline