PlantSME Plant secondary metabolism enzyme database

Calliergonella cuspidata (calliergonella_cuspidata)

Imported from atlas release summary for Calliergonella cuspidata.

703
Candidate Genes
102
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (94)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 176 11 POD (86) View species results
Terpenoid pathway 167 19 BAHD (65) View species results
Alkaloid pathway 137 18 PYKS (29) View species results
Flavonoid pathway 107 12 CHS (29) View species results
Rosmarinic acid pathway 76 7 PAL (26) View species results
Steroid pathway 40 12 CAS (14) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 739 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 108 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: T3O
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Gene Pathway Family Confidence Status
Ccusscaffold_10003060 Alkaloid T3O medium pass
Ccusscaffold_100037840 Alkaloid T3O medium borderline
Ccusscaffold_10003910 Alkaloid T3O medium borderline
Ccusscaffold_10005020 Alkaloid T3O medium borderline
Ccusscaffold_110043250 Alkaloid T3O medium borderline
Ccusscaffold_110058040 Alkaloid T3O medium pass
Ccusscaffold_110058050 Alkaloid T3O medium pass
Ccusscaffold_110058380 Alkaloid T3O medium pass
Ccusscaffold_110058390 Alkaloid T3O medium pass
Ccusscaffold_110060130 Alkaloid T3O medium borderline
Ccusscaffold_20075680 Alkaloid T3O medium borderline
Ccusscaffold_20079450 Alkaloid T3O medium pass
Ccusscaffold_20083130 Alkaloid T3O medium pass
Ccusscaffold_20083170 Alkaloid T3O medium pass
Ccusscaffold_30085840 Alkaloid T3O medium pass
Ccusscaffold_30085850 Alkaloid T3O medium pass
Ccusscaffold_30085880 Alkaloid T3O medium pass
Ccusscaffold_40110930 Alkaloid T3O medium pass
Ccusscaffold_40112540 Alkaloid T3O medium borderline
Ccusscaffold_40112570 Alkaloid T3O medium borderline
Ccusscaffold_50118430 Alkaloid T3O medium borderline
Ccusscaffold_50118460 Alkaloid T3O medium borderline
Ccusscaffold_50157980 Alkaloid T3O low borderline
Ccusscaffold_60164240 Alkaloid T3O medium borderline
Ccusscaffold_60165140 Alkaloid T3O medium borderline
Ccusscaffold_60169520 Alkaloid T3O low borderline
Ccusscaffold_60172840 Alkaloid T3O low borderline
Ccusscaffold_60172860 Alkaloid T3O low borderline
Ccusscaffold_60183540 Alkaloid T3O medium borderline
Ccusscaffold_60186400 Alkaloid T3O medium borderline
Ccusscaffold_70211330 Alkaloid T3O medium borderline
Ccusscaffold_80220670 Alkaloid T3O medium borderline
Ccusscaffold_80221810 Alkaloid T3O medium pass
Ccusscaffold_80230070 Alkaloid T3O medium borderline
Ccusscaffold_90243510 Alkaloid T3O medium pass
Ccusscaffold_90247340 Alkaloid T3O medium pass
Ccusscaffold_90249730 Alkaloid T3O medium borderline