PlantSME Plant secondary metabolism enzyme database

Calliergonella cuspidata (calliergonella_cuspidata)

Imported from atlas release summary for Calliergonella cuspidata.

703
Candidate Genes
102
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (94)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 176 11 POD (86) View species results
Terpenoid pathway 167 19 BAHD (65) View species results
Alkaloid pathway 137 18 PYKS (29) View species results
Flavonoid pathway 107 12 CHS (29) View species results
Rosmarinic acid pathway 76 7 PAL (26) View species results
Steroid pathway 40 12 CAS (14) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 739 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 108 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: PYKS
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Gene Pathway Family Confidence Status
Ccusscaffold_100025530 Alkaloid PYKS low borderline
Ccusscaffold_100027340 Alkaloid PYKS high pass
Ccusscaffold_10017850 Alkaloid PYKS low borderline
Ccusscaffold_110048460 Alkaloid PYKS high pass
Ccusscaffold_110048850 Alkaloid PYKS high pass
Ccusscaffold_110050370 Alkaloid PYKS high pass
Ccusscaffold_110050380 Alkaloid PYKS medium pass
Ccusscaffold_110050400 Alkaloid PYKS medium pass
Ccusscaffold_110053310 Alkaloid PYKS high pass
Ccusscaffold_110053350 Alkaloid PYKS medium pass
Ccusscaffold_110053390 Alkaloid PYKS high pass
Ccusscaffold_110053420 Alkaloid PYKS high pass
Ccusscaffold_20074190 Alkaloid PYKS low borderline
Ccusscaffold_30085300 Alkaloid PYKS low borderline
Ccusscaffold_30085690 Alkaloid PYKS low borderline
Ccusscaffold_40097770 Alkaloid PYKS low borderline
Ccusscaffold_50115980 Alkaloid PYKS low borderline
Ccusscaffold_50134590 Alkaloid PYKS low borderline
Ccusscaffold_50136130 Alkaloid PYKS medium pass
Ccusscaffold_50136140 Alkaloid PYKS medium pass
Ccusscaffold_50136150 Alkaloid PYKS medium pass
Ccusscaffold_50136160 Alkaloid PYKS high pass
Ccusscaffold_50136170 Alkaloid PYKS high pass
Ccusscaffold_50149130 Alkaloid PYKS medium pass
Ccusscaffold_60162930 Alkaloid PYKS medium pass
Ccusscaffold_60179900 Alkaloid PYKS low borderline
Ccusscaffold_70210120 Alkaloid PYKS low borderline
Ccusscaffold_70215380 Alkaloid PYKS low borderline
Ccusscaffold_90245720 Alkaloid PYKS high pass
Ccusscaffold_90246280 Alkaloid PYKS high pass
Ccusscaffold_90248090 Alkaloid PYKS low borderline
Ccusscaffold_90255840 Alkaloid PYKS high pass
Ccusscaffold_90255850 Alkaloid PYKS medium pass
Ccusscaffold_90255860 Alkaloid PYKS medium pass
Ccusscaffold_90255870 Alkaloid PYKS high pass
Ccusscaffold_90255880 Alkaloid PYKS medium pass
Ccusscaffold_90262040 Alkaloid PYKS high pass
Ccusscaffold_90262090 Alkaloid PYKS high pass
Ccusscaffold_90262130 Alkaloid PYKS high pass
Ccusscaffold_90262170 Alkaloid PYKS high pass
Ccusscaffold_90262200 Alkaloid PYKS high pass