PlantSME Plant secondary metabolism enzyme database

Calliergonella cuspidata (calliergonella_cuspidata)

Imported from atlas release summary for Calliergonella cuspidata.

703
Candidate Genes
102
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (94)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 176 11 POD (86) View species results
Terpenoid pathway 167 19 BAHD (65) View species results
Alkaloid pathway 137 18 PYKS (29) View species results
Flavonoid pathway 107 12 CHS (29) View species results
Rosmarinic acid pathway 76 7 PAL (26) View species results
Steroid pathway 40 12 CAS (14) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 739 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 108 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CHS
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Gene Pathway Family Confidence Status Best Target
Ccusscaffold_100027340 Flavonoid CHS medium pass CHS__00001__sp_A0A2Z5QL08_CHS_RHODA
Ccusscaffold_110048460 Flavonoid CHS medium pass CHS__00001__sp_A0A2Z5QL08_CHS_RHODA
Ccusscaffold_110048850 Flavonoid CHS medium pass CHS__00001__sp_A0A2Z5QL08_CHS_RHODA
Ccusscaffold_110050370 Flavonoid CHS medium pass CHS__00011__sp_Q9FUB7_CHSY_HYPAN
Ccusscaffold_110050380 Flavonoid CHS medium pass CHS__00011__sp_Q9FUB7_CHSY_HYPAN
Ccusscaffold_110050400 Flavonoid CHS medium pass CHS__00011__sp_Q9FUB7_CHSY_HYPAN
Ccusscaffold_110053310 Flavonoid CHS medium pass CHS__00011__sp_Q9FUB7_CHSY_HYPAN
Ccusscaffold_110053350 Flavonoid CHS medium pass CHS__00001__sp_A0A2Z5QL08_CHS_RHODA
Ccusscaffold_110053390 Flavonoid CHS medium pass CHS__00001__sp_A0A2Z5QL08_CHS_RHODA
Ccusscaffold_110053420 Flavonoid CHS medium pass CHS__00001__sp_A0A2Z5QL08_CHS_RHODA
Ccusscaffold_50136130 Flavonoid CHS medium pass CHS__00010__sp_Q9FEY5_CHSH1_HUMLU
Ccusscaffold_50136140 Flavonoid CHS medium pass CHS__00011__sp_Q9FUB7_CHSY_HYPAN
Ccusscaffold_50136150 Flavonoid CHS medium pass CHS__00011__sp_Q9FUB7_CHSY_HYPAN
Ccusscaffold_50136160 Flavonoid CHS medium pass CHS__00011__sp_Q9FUB7_CHSY_HYPAN
Ccusscaffold_50136170 Flavonoid CHS medium pass CHS__00011__sp_Q9FUB7_CHSY_HYPAN
Ccusscaffold_50149130 Flavonoid CHS medium pass CHS__00006__sp_P30074_CHS2_MEDSA
Ccusscaffold_60162930 Flavonoid CHS medium pass CHS__00001__sp_A0A2Z5QL08_CHS_RHODA
Ccusscaffold_90245720 Flavonoid CHS medium pass CHS__00007__sp_Q8RVK9_CHS_CANSA
Ccusscaffold_90246280 Flavonoid CHS medium pass CHS__00001__sp_A0A2Z5QL08_CHS_RHODA
Ccusscaffold_90255840 Flavonoid CHS medium pass CHS__00007__sp_Q8RVK9_CHS_CANSA
Ccusscaffold_90255850 Flavonoid CHS medium pass CHS__00007__sp_Q8RVK9_CHS_CANSA
Ccusscaffold_90255860 Flavonoid CHS medium pass CHS__00007__sp_Q8RVK9_CHS_CANSA
Ccusscaffold_90255870 Flavonoid CHS medium pass CHS__00007__sp_Q8RVK9_CHS_CANSA
Ccusscaffold_90255880 Flavonoid CHS medium pass CHS__00011__sp_Q9FUB7_CHSY_HYPAN
Ccusscaffold_90262040 Flavonoid CHS medium pass CHS__00008__sp_Q9AU09_PKS3_RUBID
Ccusscaffold_90262090 Flavonoid CHS medium pass CHS__00008__sp_Q9AU09_PKS3_RUBID
Ccusscaffold_90262130 Flavonoid CHS medium pass CHS__00008__sp_Q9AU09_PKS3_RUBID
Ccusscaffold_90262170 Flavonoid CHS medium pass CHS__00008__sp_Q9AU09_PKS3_RUBID
Ccusscaffold_90262200 Flavonoid CHS medium pass CHS__00011__sp_Q9FUB7_CHSY_HYPAN