PlantSME Plant secondary metabolism enzyme database

Hygroamblystegium varium (hygroamblystegium_varium)

Imported from atlas release summary for Hygroamblystegium varium.

1226
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 327 11 POD (177) View species results
Terpenoid pathway 295 20 BAHD (119) View species results
Alkaloid pathway 225 20 NMT (45) View species results
Flavonoid pathway 162 9 UFGT (49) View species results
Rosmarinic acid pathway 126 7 C4H (40) View species results
Steroid pathway 91 12 CAS (38) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 917 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 223 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Gene Pathway Family Confidence Status
HvarHygva10930008960 Alkaloid 16OMT medium borderline
HvarHygva1533930075170 Alkaloid 16OMT medium borderline
HvarHygva1572510146690 Alkaloid 16OMT medium borderline
HvarHygva1573590150810 Alkaloid 16OMT medium borderline
HvarHygva1581500176730 Alkaloid 16OMT medium borderline
HvarHygva1763100263720 Alkaloid 16OMT medium borderline
HvarHygva1763110263840 Alkaloid 16OMT medium borderline
HvarHygva19110288820 Alkaloid 16OMT medium borderline
HvarHygva21850313460 Alkaloid 16OMT medium borderline
HvarHygva24940342610 Alkaloid 16OMT medium borderline
HvarHygva30760398770 Alkaloid 16OMT medium borderline
HvarHygva6970445000 Alkaloid 16OMT medium borderline
HvarHygva1572510146680 Alkaloid 6OMT_4OMT_SOMT medium borderline
HvarHygva1580790174310 Alkaloid 6OMT_4OMT_SOMT medium borderline
HvarHygva23580329160 Alkaloid 6OMT_4OMT_SOMT low borderline
HvarHygva23930332230 Alkaloid 6OMT_4OMT_SOMT medium pass
HvarHygva6410439060 Alkaloid 6OMT_4OMT_SOMT low borderline
HvarHygva10260002830 Alkaloid 7DLGT medium pass
HvarHygva10260002840 Alkaloid 7DLGT medium pass
HvarHygva10350003720 Alkaloid 7DLGT low borderline
HvarHygva1122210011340 Alkaloid 7DLGT medium pass
HvarHygva11690016290 Alkaloid 7DLGT low borderline
HvarHygva1378460038420 Alkaloid 7DLGT high pass
HvarHygva1386230040330 Alkaloid 7DLGT high pass
HvarHygva1420044350 Alkaloid 7DLGT low borderline
HvarHygva1471560054170 Alkaloid 7DLGT low borderline
HvarHygva15150066720 Alkaloid 7DLGT medium pass
HvarHygva15150066740 Alkaloid 7DLGT high pass
HvarHygva15220069590 Alkaloid 7DLGT low borderline
HvarHygva1537430077090 Alkaloid 7DLGT low borderline
HvarHygva15410080370 Alkaloid 7DLGT medium pass
HvarHygva15410080390 Alkaloid 7DLGT medium pass
HvarHygva1559870107140 Alkaloid 7DLGT low borderline
HvarHygva1563360116650 Alkaloid 7DLGT low borderline
HvarHygva1571850143810 Alkaloid 7DLGT low borderline
HvarHygva1577330162420 Alkaloid 7DLGT low borderline
HvarHygva1577900164840 Alkaloid 7DLGT low borderline
HvarHygva1578280166210 Alkaloid 7DLGT medium pass
HvarHygva1578280166230 Alkaloid 7DLGT high pass
HvarHygva1578280166250 Alkaloid 7DLGT high pass
HvarHygva1578340166390 Alkaloid 7DLGT medium pass
HvarHygva15810174840 Alkaloid 7DLGT low borderline
HvarHygva1586890195830 Alkaloid 7DLGT medium pass
HvarHygva16230213460 Alkaloid 7DLGT medium pass
HvarHygva1636090215090 Alkaloid 7DLGT medium pass
HvarHygva1636110215150 Alkaloid 7DLGT medium pass
HvarHygva1652190216890 Alkaloid 7DLGT medium pass
HvarHygva1746380250830 Alkaloid 7DLGT low borderline
HvarHygva1746390250840 Alkaloid 7DLGT low borderline
HvarHygva1746400250850 Alkaloid 7DLGT low borderline