PlantSME Plant secondary metabolism enzyme database

Hygroamblystegium varium (hygroamblystegium_varium)

Imported from atlas release summary for Hygroamblystegium varium.

1226
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 327 11 POD (177) View species results
Terpenoid pathway 295 20 BAHD (119) View species results
Alkaloid pathway 225 20 NMT (45) View species results
Flavonoid pathway 162 9 UFGT (49) View species results
Rosmarinic acid pathway 126 7 C4H (40) View species results
Steroid pathway 91 12 CAS (38) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 917 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 223 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CHS
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Gene Pathway Family Confidence Status Best Target
HvarHygva10740007200 Flavonoid CHS medium pass CHS__00001__sp_A0A2Z5QL08_CHS_RHODA
HvarHygva10930008940 Flavonoid CHS medium pass CHS__00007__sp_Q8RVK9_CHS_CANSA
HvarHygva11010009800 Flavonoid CHS medium pass CHS__00007__sp_Q8RVK9_CHS_CANSA
HvarHygva11630015810 Flavonoid CHS medium pass CHS__00011__sp_Q9FUB7_CHSY_HYPAN
HvarHygva12440023480 Flavonoid CHS medium pass CHS__00011__sp_Q9FUB7_CHSY_HYPAN
HvarHygva1400840042830 Flavonoid CHS medium pass CHS__00011__sp_Q9FUB7_CHSY_HYPAN
HvarHygva1438670048330 Flavonoid CHS medium pass CHS__00008__sp_Q9AU09_PKS3_RUBID
HvarHygva1463680052470 Flavonoid CHS medium pass CHS__00008__sp_Q9AU09_PKS3_RUBID
HvarHygva1486200057630 Flavonoid CHS low borderline CHS__00004__sp_C6KI62_CHSL1_CANSA
HvarHygva1496130060570 Flavonoid CHS medium pass CHS__00011__sp_Q9FUB7_CHSY_HYPAN
HvarHygva1512040065760 Flavonoid CHS medium pass CHS__00004__sp_C6KI62_CHSL1_CANSA
HvarHygva1516550067080 Flavonoid CHS low borderline CHS__00010__sp_Q9FEY5_CHSH1_HUMLU
HvarHygva1538760078340 Flavonoid CHS medium pass CHS__00008__sp_Q9AU09_PKS3_RUBID
HvarHygva1552260094480 Flavonoid CHS medium pass CHS__00011__sp_Q9FUB7_CHSY_HYPAN
HvarHygva1559120106250 Flavonoid CHS medium pass CHS__00011__sp_Q9FUB7_CHSY_HYPAN
HvarHygva1561020110170 Flavonoid CHS medium pass CHS__00011__sp_Q9FUB7_CHSY_HYPAN
HvarHygva1561230111260 Flavonoid CHS medium pass CHS__00007__sp_Q8RVK9_CHS_CANSA
HvarHygva1566890127390 Flavonoid CHS medium pass CHS__00004__sp_C6KI62_CHSL1_CANSA
HvarHygva1567400129810 Flavonoid CHS medium pass CHS__00001__sp_A0A2Z5QL08_CHS_RHODA
HvarHygva1567910131010 Flavonoid CHS medium pass CHS__00011__sp_Q9FUB7_CHSY_HYPAN
HvarHygva1572900147980 Flavonoid CHS medium pass CHS__00001__sp_A0A2Z5QL08_CHS_RHODA
HvarHygva1573790151520 Flavonoid CHS medium pass CHS__00001__sp_A0A2Z5QL08_CHS_RHODA
HvarHygva1576550160350 Flavonoid CHS medium pass CHS__00011__sp_Q9FUB7_CHSY_HYPAN
HvarHygva1576550160370 Flavonoid CHS medium pass CHS__00011__sp_Q9FUB7_CHSY_HYPAN
HvarHygva1578290166260 Flavonoid CHS medium pass CHS__00007__sp_Q8RVK9_CHS_CANSA
HvarHygva1578400166780 Flavonoid CHS medium pass CHS__00011__sp_Q9FUB7_CHSY_HYPAN
HvarHygva1585740191160 Flavonoid CHS medium pass CHS__00011__sp_Q9FUB7_CHSY_HYPAN
HvarHygva15860192340 Flavonoid CHS medium pass CHS__00011__sp_Q9FUB7_CHSY_HYPAN
HvarHygva17750273580 Flavonoid CHS medium pass CHS__00011__sp_Q9FUB7_CHSY_HYPAN
HvarHygva21900314200 Flavonoid CHS medium pass CHS__00011__sp_Q9FUB7_CHSY_HYPAN
HvarHygva30770398800 Flavonoid CHS medium pass CHS__00001__sp_A0A2Z5QL08_CHS_RHODA