PlantSME Plant secondary metabolism enzyme database

Hygroamblystegium varium (hygroamblystegium_varium)

Imported from atlas release summary for Hygroamblystegium varium.

1226
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 327 11 POD (177) View species results
Terpenoid pathway 295 20 BAHD (119) View species results
Alkaloid pathway 225 20 NMT (45) View species results
Flavonoid pathway 162 9 UFGT (49) View species results
Rosmarinic acid pathway 126 7 C4H (40) View species results
Steroid pathway 91 12 CAS (38) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 917 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 223 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: DWF4/CYP90B1
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Gene Pathway Family Confidence Status
HvarHygva1080007490 Steroid DWF4/CYP90B1 low borderline
HvarHygva11040009910 Steroid DWF4/CYP90B1 low borderline
HvarHygva11040009920 Steroid DWF4/CYP90B1 medium borderline
HvarHygva12460023820 Steroid DWF4/CYP90B1 medium borderline
HvarHygva1370037080 Steroid DWF4/CYP90B1 low borderline
HvarHygva1429860046220 Steroid DWF4/CYP90B1 low borderline
HvarHygva14610052200 Steroid DWF4/CYP90B1 low borderline
HvarHygva1476400055700 Steroid DWF4/CYP90B1 low borderline
HvarHygva14810056560 Steroid DWF4/CYP90B1 low borderline
HvarHygva1490058530 Steroid DWF4/CYP90B1 medium borderline
HvarHygva1502330062320 Steroid DWF4/CYP90B1 low borderline
HvarHygva15420081220 Steroid DWF4/CYP90B1 low borderline
HvarHygva1545440085620 Steroid DWF4/CYP90B1 medium borderline
HvarHygva1546280086540 Steroid DWF4/CYP90B1 low borderline
HvarHygva1553520096000 Steroid DWF4/CYP90B1 low borderline
HvarHygva1556650101840 Steroid DWF4/CYP90B1 low borderline
HvarHygva1568930134300 Steroid DWF4/CYP90B1 low borderline
HvarHygva1571030141010 Steroid DWF4/CYP90B1 medium borderline
HvarHygva1573690151280 Steroid DWF4/CYP90B1 low borderline
HvarHygva1573790151530 Steroid DWF4/CYP90B1 medium borderline
HvarHygva1579870170910 Steroid DWF4/CYP90B1 low borderline
HvarHygva1583610183750 Steroid DWF4/CYP90B1 low borderline
HvarHygva1583990184620 Steroid DWF4/CYP90B1 low borderline
HvarHygva1586970196080 Steroid DWF4/CYP90B1 medium borderline
HvarHygva1636120215160 Steroid DWF4/CYP90B1 low borderline
HvarHygva1636130215180 Steroid DWF4/CYP90B1 low borderline
HvarHygva16630218330 Steroid DWF4/CYP90B1 low borderline
HvarHygva17120225350 Steroid DWF4/CYP90B1 low borderline
HvarHygva17930278670 Steroid DWF4/CYP90B1 low borderline
HvarHygva18970287470 Steroid DWF4/CYP90B1 low borderline
HvarHygva20000297350 Steroid DWF4/CYP90B1 low borderline
HvarHygva20000297360 Steroid DWF4/CYP90B1 low borderline
HvarHygva21290308890 Steroid DWF4/CYP90B1 low borderline
HvarHygva2130309000 Steroid DWF4/CYP90B1 low borderline
HvarHygva22090315790 Steroid DWF4/CYP90B1 medium borderline
HvarHygva22260316960 Steroid DWF4/CYP90B1 low borderline
HvarHygva24260335140 Steroid DWF4/CYP90B1 low borderline
HvarHygva24380336150 Steroid DWF4/CYP90B1 low borderline
HvarHygva26630359330 Steroid DWF4/CYP90B1 low borderline
HvarHygva27380366480 Steroid DWF4/CYP90B1 low borderline
HvarHygva28430376460 Steroid DWF4/CYP90B1 low borderline
HvarHygva29250383170 Steroid DWF4/CYP90B1 low borderline
HvarHygva30320393520 Steroid DWF4/CYP90B1 low borderline
HvarHygva3790412010 Steroid DWF4/CYP90B1 medium borderline
HvarHygva3800412190 Steroid DWF4/CYP90B1 low borderline
HvarHygva5160425450 Steroid DWF4/CYP90B1 low borderline
HvarHygva8280457000 Steroid DWF4/CYP90B1 medium borderline
HvarHygva8330457560 Steroid DWF4/CYP90B1 low borderline
HvarHygva8410458610 Steroid DWF4/CYP90B1 low borderline
HvarHygva9260466820 Steroid DWF4/CYP90B1 low borderline