PlantSME Plant secondary metabolism enzyme database

Hygroamblystegium varium (hygroamblystegium_varium)

Imported from atlas release summary for Hygroamblystegium varium.

1226
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 327 11 POD (177) View species results
Terpenoid pathway 295 20 BAHD (119) View species results
Alkaloid pathway 225 20 NMT (45) View species results
Flavonoid pathway 162 9 UFGT (49) View species results
Rosmarinic acid pathway 126 7 C4H (40) View species results
Steroid pathway 91 12 CAS (38) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 917 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 223 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Rosmarinic acid pathway
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Gene Pathway Family Confidence Status
HvarHygva10370003860 Rosmarinic Acid 4CL medium pass
HvarHygva1080007520 Rosmarinic Acid 4CL low borderline
HvarHygva13380033530 Rosmarinic Acid 4CL low borderline
HvarHygva1490058510 Rosmarinic Acid 4CL medium pass
HvarHygva15300073160 Rosmarinic Acid 4CL low borderline
HvarHygva1532170074440 Rosmarinic Acid 4CL medium pass
HvarHygva1536090076480 Rosmarinic Acid 4CL low borderline
HvarHygva1543000082440 Rosmarinic Acid 4CL medium pass
HvarHygva1545530085720 Rosmarinic Acid 4CL low borderline
HvarHygva1555500100110 Rosmarinic Acid 4CL medium pass
HvarHygva1556180101270 Rosmarinic Acid 4CL low borderline
HvarHygva1564920120550 Rosmarinic Acid 4CL medium pass
HvarHygva1567180128840 Rosmarinic Acid 4CL medium pass
HvarHygva1567180128850 Rosmarinic Acid 4CL medium pass
HvarHygva1575080154990 Rosmarinic Acid 4CL medium pass
HvarHygva1575600157200 Rosmarinic Acid 4CL medium pass
HvarHygva1575600157210 Rosmarinic Acid 4CL low borderline
HvarHygva1578560167290 Rosmarinic Acid 4CL medium pass
HvarHygva1582840181410 Rosmarinic Acid 4CL low borderline
HvarHygva1583610183830 Rosmarinic Acid 4CL medium pass
HvarHygva1584250185900 Rosmarinic Acid 4CL medium pass
HvarHygva1585250189650 Rosmarinic Acid 4CL medium pass
HvarHygva1586820195120 Rosmarinic Acid 4CL medium pass
HvarHygva1587360198280 Rosmarinic Acid 4CL medium pass
HvarHygva1588420202160 Rosmarinic Acid 4CL low borderline
HvarHygva1589900207140 Rosmarinic Acid 4CL low borderline
HvarHygva1719520231530 Rosmarinic Acid 4CL low borderline
HvarHygva1719530231540 Rosmarinic Acid 4CL low borderline
HvarHygva17310239240 Rosmarinic Acid 4CL medium pass
HvarHygva17570257930 Rosmarinic Acid 4CL medium pass
HvarHygva1770640270550 Rosmarinic Acid 4CL low borderline
HvarHygva1770650270590 Rosmarinic Acid 4CL low borderline
HvarHygva19550292640 Rosmarinic Acid 4CL medium pass
HvarHygva20260299460 Rosmarinic Acid 4CL low borderline
HvarHygva20680303710 Rosmarinic Acid 4CL low borderline
HvarHygva23650330060 Rosmarinic Acid 4CL medium pass
HvarHygva26210354620 Rosmarinic Acid 4CL low borderline
HvarHygva26410356960 Rosmarinic Acid 4CL medium pass
HvarHygva27120363810 Rosmarinic Acid 4CL medium pass
HvarHygva27380366410 Rosmarinic Acid 4CL low borderline
HvarHygva27710369890 Rosmarinic Acid 4CL low borderline
HvarHygva27970371920 Rosmarinic Acid 4CL medium pass
HvarHygva280372480 Rosmarinic Acid 4CL medium pass
HvarHygva28880379760 Rosmarinic Acid 4CL low borderline
HvarHygva30110391980 Rosmarinic Acid 4CL low borderline
HvarHygva30460395140 Rosmarinic Acid 4CL low borderline
HvarHygva3720411260 Rosmarinic Acid 4CL medium pass
HvarHygva5480428920 Rosmarinic Acid 4CL low borderline
HvarHygva660441010 Rosmarinic Acid 4CL medium pass
HvarHygva7000445400 Rosmarinic Acid 4CL low borderline