PlantSME Plant secondary metabolism enzyme database

Hygroamblystegium varium (hygroamblystegium_varium)

Imported from atlas release summary for Hygroamblystegium varium.

1226
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 327 11 POD (177) View species results
Terpenoid pathway 295 20 BAHD (119) View species results
Alkaloid pathway 225 20 NMT (45) View species results
Flavonoid pathway 162 9 UFGT (49) View species results
Rosmarinic acid pathway 126 7 C4H (40) View species results
Steroid pathway 91 12 CAS (38) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 917 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 223 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: IO
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Gene Pathway Family Confidence Status
HvarHygva10350003670 Alkaloid IO medium borderline
HvarHygva10480005050 Alkaloid IO medium borderline
HvarHygva12460023870 Alkaloid IO medium borderline
HvarHygva12830028770 Alkaloid IO medium borderline
HvarHygva1370037080 Alkaloid IO medium borderline
HvarHygva14070043120 Alkaloid IO medium borderline
HvarHygva1470053550 Alkaloid IO medium borderline
HvarHygva1477530056100 Alkaloid IO medium borderline
HvarHygva1533460075000 Alkaloid IO medium borderline
HvarHygva15420081220 Alkaloid IO medium borderline
HvarHygva1556650101840 Alkaloid IO low borderline
HvarHygva15610110050 Alkaloid IO medium borderline
HvarHygva1568570133340 Alkaloid IO medium borderline
HvarHygva1568700133730 Alkaloid IO low borderline
HvarHygva1573790151530 Alkaloid IO medium borderline
HvarHygva1580500173260 Alkaloid IO low borderline
HvarHygva1584660187400 Alkaloid IO medium borderline
HvarHygva1586820195150 Alkaloid IO medium borderline
HvarHygva1710224670 Alkaloid IO low borderline
HvarHygva17130226830 Alkaloid IO medium borderline
HvarHygva1731710239660 Alkaloid IO medium borderline
HvarHygva19700294320 Alkaloid IO low borderline
HvarHygva2020298890 Alkaloid IO medium borderline
HvarHygva20430301030 Alkaloid IO medium borderline
HvarHygva20860305070 Alkaloid IO medium borderline
HvarHygva24200334660 Alkaloid IO medium borderline
HvarHygva24380336160 Alkaloid IO medium borderline
HvarHygva24690339620 Alkaloid IO medium borderline
HvarHygva27510367590 Alkaloid IO medium borderline
HvarHygva28320375670 Alkaloid IO medium borderline
HvarHygva28430376460 Alkaloid IO medium borderline
HvarHygva29730388080 Alkaloid IO medium borderline
HvarHygva29950390070 Alkaloid IO medium borderline
HvarHygva31120403790 Alkaloid IO medium borderline
HvarHygva5460428810 Alkaloid IO medium borderline
HvarHygva8230456290 Alkaloid IO medium borderline
HvarHygva8330457560 Alkaloid IO medium borderline