PlantSME Plant secondary metabolism enzyme database

Hygroamblystegium varium (hygroamblystegium_varium)

Imported from atlas release summary for Hygroamblystegium varium.

1226
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 327 11 POD (177) View species results
Terpenoid pathway 295 20 BAHD (119) View species results
Alkaloid pathway 225 20 NMT (45) View species results
Flavonoid pathway 162 9 UFGT (49) View species results
Rosmarinic acid pathway 126 7 C4H (40) View species results
Steroid pathway 91 12 CAS (38) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 917 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 223 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: G8O/G8H
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Gene Pathway Family Confidence Status
HvarHygva12460023810 Alkaloid G8O/G8H medium borderline
HvarHygva14070043130 Alkaloid G8O/G8H low borderline
HvarHygva1533460074990 Alkaloid G8O/G8H medium borderline
HvarHygva1554560097840 Alkaloid G8O/G8H medium borderline
HvarHygva1564080118590 Alkaloid G8O/G8H low borderline
HvarHygva1569440135530 Alkaloid G8O/G8H medium borderline
HvarHygva1571850143890 Alkaloid G8O/G8H medium borderline
HvarHygva1585220189440 Alkaloid G8O/G8H medium borderline
HvarHygva18970287470 Alkaloid G8O/G8H medium borderline
HvarHygva23750330730 Alkaloid G8O/G8H medium borderline
HvarHygva2590351720 Alkaloid G8O/G8H medium borderline
HvarHygva2590351730 Alkaloid G8O/G8H medium borderline
HvarHygva26580358870 Alkaloid G8O/G8H medium borderline
HvarHygva3810412280 Alkaloid G8O/G8H medium borderline
HvarHygva5650430820 Alkaloid G8O/G8H medium borderline
HvarHygva580432570 Alkaloid G8O/G8H medium borderline
HvarHygva8410458620 Alkaloid G8O/G8H low borderline