PlantSME Plant secondary metabolism enzyme database

Hygroamblystegium varium (hygroamblystegium_varium)

Imported from atlas release summary for Hygroamblystegium varium.

1226
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 327 11 POD (177) View species results
Terpenoid pathway 295 20 BAHD (119) View species results
Alkaloid pathway 225 20 NMT (45) View species results
Flavonoid pathway 162 9 UFGT (49) View species results
Rosmarinic acid pathway 126 7 C4H (40) View species results
Steroid pathway 91 12 CAS (38) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 917 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 223 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: SMT1/SMT2/SMT3
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Gene Pathway Family Confidence Status
HvarHygva11930018450 Steroid SMT1/SMT2/SMT3 medium pass
HvarHygva12580025370 Steroid SMT1/SMT2/SMT3 medium pass
HvarHygva1310030560 Steroid SMT1/SMT2/SMT3 low borderline
HvarHygva13380033430 Steroid SMT1/SMT2/SMT3 medium pass
HvarHygva13850039980 Steroid SMT1/SMT2/SMT3 low borderline
HvarHygva1561350111370 Steroid SMT1/SMT2/SMT3 low borderline
HvarHygva1566320124540 Steroid SMT1/SMT2/SMT3 low borderline
HvarHygva15720144720 Steroid SMT1/SMT2/SMT3 low borderline
HvarHygva1580171330 Steroid SMT1/SMT2/SMT3 low borderline
HvarHygva1580250172500 Steroid SMT1/SMT2/SMT3 low borderline
HvarHygva1580380172950 Steroid SMT1/SMT2/SMT3 medium pass
HvarHygva1582900181520 Steroid SMT1/SMT2/SMT3 medium pass
HvarHygva1585100188890 Steroid SMT1/SMT2/SMT3 medium pass
HvarHygva1586120192640 Steroid SMT1/SMT2/SMT3 low borderline
HvarHygva1586620194440 Steroid SMT1/SMT2/SMT3 low borderline
HvarHygva1587290197580 Steroid SMT1/SMT2/SMT3 low borderline
HvarHygva16970222970 Steroid SMT1/SMT2/SMT3 medium pass
HvarHygva17170230120 Steroid SMT1/SMT2/SMT3 low borderline
HvarHygva1737420243690 Steroid SMT1/SMT2/SMT3 medium pass
HvarHygva1737430243750 Steroid SMT1/SMT2/SMT3 medium pass
HvarHygva1743810248730 Steroid SMT1/SMT2/SMT3 low borderline
HvarHygva1743820248750 Steroid SMT1/SMT2/SMT3 low borderline
HvarHygva19760294990 Steroid SMT1/SMT2/SMT3 low borderline
HvarHygva25850351370 Steroid SMT1/SMT2/SMT3 low borderline
HvarHygva28310375580 Steroid SMT1/SMT2/SMT3 low borderline
HvarHygva28500376840 Steroid SMT1/SMT2/SMT3 low borderline
HvarHygva30070391730 Steroid SMT1/SMT2/SMT3 low borderline
HvarHygva31050402070 Steroid SMT1/SMT2/SMT3 medium pass
HvarHygva3260406530 Steroid SMT1/SMT2/SMT3 medium pass
HvarHygva410414800 Steroid SMT1/SMT2/SMT3 low borderline
HvarHygva4680420790 Steroid SMT1/SMT2/SMT3 low borderline
HvarHygva5370428230 Steroid SMT1/SMT2/SMT3 low borderline
HvarHygva5570430010 Steroid SMT1/SMT2/SMT3 medium pass
HvarHygva6150436230 Steroid SMT1/SMT2/SMT3 low borderline
HvarHygva7320447610 Steroid SMT1/SMT2/SMT3 low borderline
HvarHygva790453560 Steroid SMT1/SMT2/SMT3 medium pass
HvarHygva960470600 Steroid SMT1/SMT2/SMT3 medium pass