PlantSME Plant secondary metabolism enzyme database

Hygroamblystegium varium (hygroamblystegium_varium)

Imported from atlas release summary for Hygroamblystegium varium.

1226
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 327 11 POD (177) View species results
Terpenoid pathway 295 20 BAHD (119) View species results
Alkaloid pathway 225 20 NMT (45) View species results
Flavonoid pathway 162 9 UFGT (49) View species results
Rosmarinic acid pathway 126 7 C4H (40) View species results
Steroid pathway 91 12 CAS (38) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 917 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 223 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: GS
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Gene Pathway Family Confidence Status
HvarHygva10080000840 Alkaloid GS low borderline
HvarHygva10240002710 Alkaloid GS low borderline
HvarHygva1100009640 Alkaloid GS medium pass
HvarHygva11270011670 Alkaloid GS low borderline
HvarHygva11270011680 Alkaloid GS medium pass
HvarHygva11540014460 Alkaloid GS low borderline
HvarHygva1160015140 Alkaloid GS low borderline
HvarHygva13440033970 Alkaloid GS low borderline
HvarHygva1360035900 Alkaloid GS low borderline
HvarHygva15220069550 Alkaloid GS low borderline
HvarHygva1546120086410 Alkaloid GS low borderline
HvarHygva1560670109140 Alkaloid GS low borderline
HvarHygva1566870127360 Alkaloid GS low borderline
HvarHygva1567180128830 Alkaloid GS high pass
HvarHygva1567450130030 Alkaloid GS high pass
HvarHygva1568330132370 Alkaloid GS low borderline
HvarHygva1568590133450 Alkaloid GS medium pass
HvarHygva1570030137390 Alkaloid GS low borderline
HvarHygva1571440142010 Alkaloid GS low borderline
HvarHygva1572650147320 Alkaloid GS low borderline
HvarHygva1574740154060 Alkaloid GS low borderline
HvarHygva1576170158730 Alkaloid GS low borderline
HvarHygva1577580163540 Alkaloid GS low borderline
HvarHygva15780165290 Alkaloid GS low borderline
HvarHygva1578740167850 Alkaloid GS medium pass
HvarHygva1584730187670 Alkaloid GS low borderline
HvarHygva1585550190650 Alkaloid GS low borderline
HvarHygva1586850195570 Alkaloid GS low borderline
HvarHygva1589310205390 Alkaloid GS low borderline
HvarHygva1589740206780 Alkaloid GS low borderline
HvarHygva1608890212050 Alkaloid GS low borderline
HvarHygva1608900212070 Alkaloid GS low borderline
HvarHygva16230213510 Alkaloid GS low borderline
HvarHygva16860221680 Alkaloid GS high pass
HvarHygva17070224050 Alkaloid GS low borderline
HvarHygva1732390240150 Alkaloid GS low borderline
HvarHygva1732410240270 Alkaloid GS low borderline
HvarHygva1740820245920 Alkaloid GS medium pass
HvarHygva1740850246010 Alkaloid GS medium pass
HvarHygva1743210248440 Alkaloid GS high pass
HvarHygva1743230248530 Alkaloid GS high pass
HvarHygva1751500253780 Alkaloid GS low borderline
HvarHygva1751510253790 Alkaloid GS low borderline
HvarHygva18920287030 Alkaloid GS low borderline
HvarHygva1920289660 Alkaloid GS low borderline
HvarHygva1920289680 Alkaloid GS low borderline
HvarHygva19330291010 Alkaloid GS low borderline
HvarHygva19330291020 Alkaloid GS low borderline
HvarHygva20340300020 Alkaloid GS high pass
HvarHygva20480301470 Alkaloid GS low borderline