PlantSME Plant secondary metabolism enzyme database

Hygroamblystegium varium (hygroamblystegium_varium)

Imported from atlas release summary for Hygroamblystegium varium.

1226
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 327 11 POD (177) View species results
Terpenoid pathway 295 20 BAHD (119) View species results
Alkaloid pathway 225 20 NMT (45) View species results
Flavonoid pathway 162 9 UFGT (49) View species results
Rosmarinic acid pathway 126 7 C4H (40) View species results
Steroid pathway 91 12 CAS (38) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 917 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 223 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CSE
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Gene Pathway Family Confidence Status
HvarHygva11770016920 Phenylpropanoid CSE medium pass
HvarHygva1446040050070 Phenylpropanoid CSE medium pass
HvarHygva1471250053960 Phenylpropanoid CSE medium pass
HvarHygva1566200124010 Phenylpropanoid CSE medium pass
HvarHygva1583420183310 Phenylpropanoid CSE low borderline
HvarHygva1587750198910 Phenylpropanoid CSE medium pass
HvarHygva1588680202710 Phenylpropanoid CSE medium pass
HvarHygva1772930272580 Phenylpropanoid CSE medium pass
HvarHygva1772940272610 Phenylpropanoid CSE medium pass
HvarHygva18960287390 Phenylpropanoid CSE medium pass
HvarHygva20550302500 Phenylpropanoid CSE medium pass
HvarHygva21130307690 Phenylpropanoid CSE medium pass
HvarHygva22400317730 Phenylpropanoid CSE medium pass
HvarHygva22400317740 Phenylpropanoid CSE medium pass
HvarHygva25490347680 Phenylpropanoid CSE medium pass
HvarHygva26150354030 Phenylpropanoid CSE medium pass
HvarHygva27130363910 Phenylpropanoid CSE low borderline
HvarHygva280372350 Phenylpropanoid CSE medium pass
HvarHygva2830375430 Phenylpropanoid CSE low borderline
HvarHygva7720451810 Phenylpropanoid CSE medium pass
HvarHygva9020464680 Phenylpropanoid CSE medium pass
HvarHygva9820472870 Phenylpropanoid CSE low borderline
HvarHygva9880473430 Phenylpropanoid CSE medium pass