PlantSME Plant secondary metabolism enzyme database

Hygroamblystegium varium (hygroamblystegium_varium)

Imported from atlas release summary for Hygroamblystegium varium.

1226
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 327 11 POD (177) View species results
Terpenoid pathway 295 20 BAHD (119) View species results
Alkaloid pathway 225 20 NMT (45) View species results
Flavonoid pathway 162 9 UFGT (49) View species results
Rosmarinic acid pathway 126 7 C4H (40) View species results
Steroid pathway 91 12 CAS (38) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 917 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 223 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Gene Pathway Family Confidence Status
HvarHygva1746410250860 Alkaloid 7DLGT low borderline
HvarHygva17860277870 Alkaloid 7DLGT low borderline
HvarHygva17860277880 Alkaloid 7DLGT medium pass
HvarHygva18210280740 Alkaloid 7DLGT medium pass
HvarHygva18880286500 Alkaloid 7DLGT low borderline
HvarHygva20130298180 Alkaloid 7DLGT low borderline
HvarHygva20130298210 Alkaloid 7DLGT medium pass
HvarHygva2080304710 Alkaloid 7DLGT medium pass
HvarHygva2080304720 Alkaloid 7DLGT low borderline
HvarHygva23760330860 Alkaloid 7DLGT high pass
HvarHygva27380366510 Alkaloid 7DLGT low borderline
HvarHygva27500367530 Alkaloid 7DLGT low borderline
HvarHygva3280406660 Alkaloid 7DLGT low borderline
HvarHygva3470408940 Alkaloid 7DLGT high pass
HvarHygva4870422720 Alkaloid 7DLGT low borderline
HvarHygva5160425480 Alkaloid 7DLGT medium pass
HvarHygva6300437680 Alkaloid 7DLGT medium pass
HvarHygva6300437700 Alkaloid 7DLGT low borderline
HvarHygva1370037270 Alkaloid 7DLH medium borderline
HvarHygva14810056560 Alkaloid 7DLH medium borderline
HvarHygva1502330062320 Alkaloid 7DLH medium borderline
HvarHygva1568700133720 Alkaloid 7DLH low borderline
HvarHygva1570230138440 Alkaloid 7DLH medium borderline
HvarHygva1588080200450 Alkaloid 7DLH medium borderline
HvarHygva1731630239520 Alkaloid 7DLH medium borderline
HvarHygva1731640239580 Alkaloid 7DLH medium borderline
HvarHygva21290308890 Alkaloid 7DLH medium borderline
HvarHygva21860313620 Alkaloid 7DLH medium borderline
HvarHygva30380393890 Alkaloid 7DLH medium borderline
HvarHygva3830412410 Alkaloid 7DLH medium borderline
HvarHygva9640471230 Alkaloid 7DLH medium borderline
HvarHygva9760472410 Alkaloid 7DLH low borderline
HvarHygva10010000170 Alkaloid 8HGO medium borderline
HvarHygva11720016710 Alkaloid 8HGO medium borderline
HvarHygva12700026910 Alkaloid 8HGO low borderline
HvarHygva1560600109030 Alkaloid 8HGO medium borderline
HvarHygva1563720117240 Alkaloid 8HGO medium borderline
HvarHygva1564320119060 Alkaloid 8HGO medium borderline
HvarHygva1566640126310 Alkaloid 8HGO medium borderline
HvarHygva1569850136750 Alkaloid 8HGO medium pass
HvarHygva1739610244870 Alkaloid 8HGO medium borderline
HvarHygva1739620244890 Alkaloid 8HGO medium borderline
HvarHygva1766130266250 Alkaloid 8HGO low borderline
HvarHygva1766140266300 Alkaloid 8HGO low borderline
HvarHygva24300335680 Alkaloid 8HGO medium borderline
HvarHygva31030401620 Alkaloid 8HGO low borderline
HvarHygva4690420970 Alkaloid 8HGO medium pass
HvarHygva4740421380 Alkaloid 8HGO medium borderline
HvarHygva7110446400 Alkaloid 8HGO low borderline
HvarHygva750449290 Alkaloid 8HGO medium borderline