PlantSME Plant secondary metabolism enzyme database

Metzgeria hamata (metzgeria_hamata)

Imported from atlas release summary for Metzgeria hamata.

585
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 161 11 POD (96) View species results
Terpenoid pathway 144 21 BAHD (59) View species results
Alkaloid pathway 126 18 TRI/TRII (26) View species results
Flavonoid pathway 65 9 UFGT (28) View species results
Rosmarinic acid pathway 55 7 C4H (31) View species results
Steroid pathway 34 11 SMT1/SMT2/SMT3 (12) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 592 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 152 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Gene Pathway Family Confidence Status
Mhamcontig_1500072890 Alkaloid 16OMT medium borderline
Mhamcontig_1660103460 Alkaloid 16OMT medium borderline
Mhamcontig_2170159540 Alkaloid 16OMT medium borderline
Mhamcontig_2170159560 Alkaloid 16OMT medium borderline
Mhamcontig_550224550 Alkaloid 16OMT medium borderline
Mhamcontig_740263570 Alkaloid 16OMT medium borderline
Mhamcontig_1280035550 Alkaloid 6OMT_4OMT_SOMT medium borderline
Mhamcontig_1200022920 Alkaloid 7DLGT low borderline
Mhamcontig_1200023290 Alkaloid 7DLGT low borderline
Mhamcontig_1200023300 Alkaloid 7DLGT medium pass
Mhamcontig_1200023340 Alkaloid 7DLGT medium pass
Mhamcontig_1460070530 Alkaloid 7DLGT medium pass
Mhamcontig_1460070540 Alkaloid 7DLGT medium pass
Mhamcontig_1520075820 Alkaloid 7DLGT medium pass
Mhamcontig_1660100700 Alkaloid 7DLGT medium pass
Mhamcontig_1660101080 Alkaloid 7DLGT low borderline
Mhamcontig_1660101160 Alkaloid 7DLGT low borderline
Mhamcontig_1660101170 Alkaloid 7DLGT low borderline
Mhamcontig_1660101180 Alkaloid 7DLGT low borderline
Mhamcontig_1720105260 Alkaloid 7DLGT medium pass
Mhamcontig_1850125610 Alkaloid 7DLGT low borderline
Mhamcontig_2000143580 Alkaloid 7DLGT low borderline
Mhamcontig_2000143610 Alkaloid 7DLGT low borderline
Mhamcontig_2000143660 Alkaloid 7DLGT medium pass
Mhamcontig_2070150480 Alkaloid 7DLGT low borderline
Mhamcontig_2070150530 Alkaloid 7DLGT medium pass
Mhamcontig_2070150710 Alkaloid 7DLGT low borderline
Mhamcontig_2070151370 Alkaloid 7DLGT low borderline
Mhamcontig_2070151400 Alkaloid 7DLGT low borderline
Mhamcontig_2140156530 Alkaloid 7DLGT low borderline
Mhamcontig_2140156570 Alkaloid 7DLGT low borderline
Mhamcontig_2140156630 Alkaloid 7DLGT low borderline
Mhamcontig_2340182280 Alkaloid 7DLGT low borderline
Mhamcontig_2350182800 Alkaloid 7DLGT medium pass
Mhamcontig_2350182810 Alkaloid 7DLGT low borderline
Mhamcontig_550223930 Alkaloid 7DLGT medium pass
Mhamcontig_550224740 Alkaloid 7DLGT low borderline
Mhamcontig_610237930 Alkaloid 7DLGT high pass
Mhamcontig_660242430 Alkaloid 7DLGT low borderline
Mhamcontig_660242490 Alkaloid 7DLGT low borderline
Mhamcontig_870277020 Alkaloid 7DLGT low borderline
Mhamcontig_870277030 Alkaloid 7DLGT low borderline
Mhamcontig_890278360 Alkaloid 7DLGT low borderline
Mhamcontig_1640093960 Alkaloid 7DLH medium borderline
Mhamcontig_2070150660 Alkaloid 7DLH low borderline
Mhamcontig_2170162170 Alkaloid 7DLH low borderline
Mhamcontig_1160016700 Alkaloid 8HGO low borderline
Mhamcontig_1400064670 Alkaloid 8HGO medium borderline
Mhamcontig_240186810 Alkaloid 8HGO medium borderline
Mhamcontig_260198240 Alkaloid 8HGO medium borderline