PlantSME Plant secondary metabolism enzyme database

Metzgeria hamata (metzgeria_hamata)

Imported from atlas release summary for Metzgeria hamata.

585
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 161 11 POD (96) View species results
Terpenoid pathway 144 21 BAHD (59) View species results
Alkaloid pathway 126 18 TRI/TRII (26) View species results
Flavonoid pathway 65 9 UFGT (28) View species results
Rosmarinic acid pathway 55 7 C4H (31) View species results
Steroid pathway 34 11 SMT1/SMT2/SMT3 (12) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 592 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 152 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Gene Pathway Family Confidence Status
Mhamcontig_1990142150 Alkaloid ADC low borderline
Mhamcontig_390208750 Alkaloid ADC medium pass
Mhamcontig_910280700 Alkaloid ADC medium pass
Mhamcontig_1440067650 Alkaloid BBE medium borderline
Mhamcontig_1440067720 Alkaloid BBE medium borderline
Mhamcontig_1910132370 Alkaloid BBE low borderline
Mhamcontig_1910132380 Alkaloid BBE low borderline
Mhamcontig_1200024080 Alkaloid CNMT low borderline
Mhamcontig_1310045180 Alkaloid CNMT medium pass
Mhamcontig_1660098420 Alkaloid CNMT medium borderline
Mhamcontig_1660100330 Alkaloid CNMT low borderline
Mhamcontig_1810116550 Alkaloid CNMT low borderline
Mhamcontig_1940135900 Alkaloid CNMT low borderline
Mhamcontig_280203820 Alkaloid CNMT medium pass
Mhamcontig_280203840 Alkaloid CNMT medium pass
Mhamcontig_410214140 Alkaloid CNMT low borderline
Mhamcontig_630238840 Alkaloid CNMT low borderline
Mhamcontig_680253150 Alkaloid CNMT low borderline
Mhamcontig_690256600 Alkaloid CNMT low borderline
Mhamcontig_80271440 Alkaloid CNMT low borderline
Mhamcontig_910281030 Alkaloid CNMT low borderline
Mhamcontig_1540076770 Alkaloid CODM/T6ODM medium borderline
Mhamcontig_1820120910 Alkaloid CODM/T6ODM medium borderline
Mhamcontig_1840122620 Alkaloid CODM/T6ODM medium borderline
Mhamcontig_1910132200 Alkaloid CODM/T6ODM medium borderline
Mhamcontig_1910133290 Alkaloid CODM/T6ODM medium borderline
Mhamcontig_2020145110 Alkaloid CODM/T6ODM medium borderline
Mhamcontig_2070150360 Alkaloid CODM/T6ODM medium borderline
Mhamcontig_2280170130 Alkaloid CODM/T6ODM medium borderline
Mhamcontig_260199980 Alkaloid CODM/T6ODM medium borderline
Mhamcontig_590227650 Alkaloid CODM/T6ODM medium borderline
Mhamcontig_590227710 Alkaloid CODM/T6ODM medium borderline
Mhamcontig_680250540 Alkaloid CODM/T6ODM medium borderline
Mhamcontig_680250550 Alkaloid CODM/T6ODM medium borderline
Mhamcontig_680250560 Alkaloid CODM/T6ODM medium borderline
Mhamcontig_870277400 Alkaloid CODM/T6ODM medium borderline
Mhamcontig_1540077020 Alkaloid COR medium pass
Mhamcontig_1580082820 Alkaloid COR medium pass
Mhamcontig_1890127970 Alkaloid COR medium pass
Mhamcontig_2280170090 Alkaloid COR low borderline
Mhamcontig_500221770 Alkaloid COR low borderline
Mhamcontig_680244540 Alkaloid COR medium pass
Mhamcontig_680247160 Alkaloid COR medium pass
Mhamcontig_1640095610 Alkaloid CYP719 medium borderline
Mhamcontig_1780112930 Alkaloid CYP719 low borderline
Mhamcontig_2300172980 Alkaloid CYP719 medium borderline
Mhamcontig_680247670 Alkaloid CYP719 medium borderline
Mhamcontig_1160017750 Alkaloid CYP80B1 medium pass
Mhamcontig_1280038150 Alkaloid CYP80B1 medium borderline
Mhamcontig_1660100790 Alkaloid CYP80B1 medium borderline