PlantSME Plant secondary metabolism enzyme database

Metzgeria hamata (metzgeria_hamata)

Imported from atlas release summary for Metzgeria hamata.

585
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 161 11 POD (96) View species results
Terpenoid pathway 144 21 BAHD (59) View species results
Alkaloid pathway 126 18 TRI/TRII (26) View species results
Flavonoid pathway 65 9 UFGT (28) View species results
Rosmarinic acid pathway 55 7 C4H (31) View species results
Steroid pathway 34 11 SMT1/SMT2/SMT3 (12) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 592 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 152 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Gene Pathway Family Confidence Status
Mhamcontig_1730108110 Alkaloid CYP80B1 medium borderline
Mhamcontig_1160017610 Alkaloid G8O/G8H medium borderline
Mhamcontig_1290039310 Alkaloid G8O/G8H medium borderline
Mhamcontig_1460071150 Alkaloid G8O/G8H low borderline
Mhamcontig_1460071160 Alkaloid G8O/G8H medium borderline
Mhamcontig_1780112290 Alkaloid G8O/G8H medium borderline
Mhamcontig_1850124630 Alkaloid G8O/G8H medium borderline
Mhamcontig_1910133590 Alkaloid G8O/G8H medium borderline
Mhamcontig_260198350 Alkaloid G8O/G8H medium borderline
Mhamcontig_550223850 Alkaloid G8O/G8H medium borderline
Mhamcontig_60230360 Alkaloid G8O/G8H medium borderline
Mhamcontig_60230790 Alkaloid G8O/G8H medium borderline
Mhamcontig_610238370 Alkaloid G8O/G8H medium borderline
Mhamcontig_1640095080 Alkaloid GES low borderline
Mhamcontig_1660102990 Alkaloid GES low borderline
Mhamcontig_1050008490 Alkaloid GS low borderline
Mhamcontig_1280032840 Alkaloid GS low borderline
Mhamcontig_1280034930 Alkaloid GS high pass
Mhamcontig_130041690 Alkaloid GS low borderline
Mhamcontig_1520075480 Alkaloid GS low borderline
Mhamcontig_1520075570 Alkaloid GS low borderline
Mhamcontig_1550078800 Alkaloid GS low borderline
Mhamcontig_1640093860 Alkaloid GS medium pass
Mhamcontig_1640093870 Alkaloid GS low borderline
Mhamcontig_1660099960 Alkaloid GS low borderline
Mhamcontig_2170160660 Alkaloid GS low borderline
Mhamcontig_2260168140 Alkaloid GS low borderline
Mhamcontig_2280169790 Alkaloid GS low borderline
Mhamcontig_2280170800 Alkaloid GS medium pass
Mhamcontig_230172060 Alkaloid GS low borderline
Mhamcontig_2400191530 Alkaloid GS low borderline
Mhamcontig_240188050 Alkaloid GS low borderline
Mhamcontig_260195740 Alkaloid GS low borderline
Mhamcontig_260196420 Alkaloid GS medium pass
Mhamcontig_260199010 Alkaloid GS low borderline
Mhamcontig_390209990 Alkaloid GS low borderline
Mhamcontig_420215290 Alkaloid GS high pass
Mhamcontig_550224270 Alkaloid GS low borderline
Mhamcontig_660242260 Alkaloid GS low borderline
Mhamcontig_680248540 Alkaloid GS low borderline
Mhamcontig_740263740 Alkaloid GS low borderline
Mhamcontig_990285470 Alkaloid GS low borderline
Mhamcontig_1220025160 Alkaloid H6H medium pass
Mhamcontig_1310043480 Alkaloid H6H medium pass
Mhamcontig_160088050 Alkaloid H6H low borderline
Mhamcontig_1660099010 Alkaloid H6H medium pass
Mhamcontig_1660102760 Alkaloid H6H low borderline
Mhamcontig_1660102810 Alkaloid H6H low borderline
Mhamcontig_1890128410 Alkaloid H6H medium pass
Mhamcontig_1940136540 Alkaloid H6H low borderline