PlantSME Plant secondary metabolism enzyme database

Metzgeria hamata (metzgeria_hamata)

Imported from atlas release summary for Metzgeria hamata.

585
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 161 11 POD (96) View species results
Terpenoid pathway 144 21 BAHD (59) View species results
Alkaloid pathway 126 18 TRI/TRII (26) View species results
Flavonoid pathway 65 9 UFGT (28) View species results
Rosmarinic acid pathway 55 7 C4H (31) View species results
Steroid pathway 34 11 SMT1/SMT2/SMT3 (12) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 592 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 152 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Gene Pathway Family Confidence Status
Mhamcontig_1940136560 Alkaloid H6H low borderline
Mhamcontig_1990142230 Alkaloid H6H low borderline
Mhamcontig_2020145150 Alkaloid H6H low borderline
Mhamcontig_2020145230 Alkaloid H6H medium borderline
Mhamcontig_2140156170 Alkaloid H6H medium pass
Mhamcontig_2160157790 Alkaloid H6H medium pass
Mhamcontig_2160157800 Alkaloid H6H medium pass
Mhamcontig_2340182230 Alkaloid H6H low borderline
Mhamcontig_290205290 Alkaloid H6H medium borderline
Mhamcontig_390208360 Alkaloid H6H medium borderline
Mhamcontig_590227680 Alkaloid H6H low borderline
Mhamcontig_590229030 Alkaloid H6H medium borderline
Mhamcontig_610236730 Alkaloid H6H low borderline
Mhamcontig_750266840 Alkaloid H6H medium borderline
Mhamcontig_750266980 Alkaloid H6H medium borderline
Mhamcontig_750267050 Alkaloid H6H low borderline
Mhamcontig_750267060 Alkaloid H6H low borderline
Mhamcontig_750267180 Alkaloid H6H medium borderline
Mhamcontig_90279900 Alkaloid H6H medium pass
Mhamcontig_1000000670 Alkaloid IO low borderline
Mhamcontig_1310053170 Alkaloid IO medium borderline
Mhamcontig_1400063920 Alkaloid IO medium borderline
Mhamcontig_1400063930 Alkaloid IO medium borderline
Mhamcontig_1740111000 Alkaloid IO medium borderline
Mhamcontig_1910133600 Alkaloid IO medium borderline
Mhamcontig_1980139950 Alkaloid IO medium borderline
Mhamcontig_1980140710 Alkaloid IO medium pass
Mhamcontig_2300173020 Alkaloid IO medium borderline
Mhamcontig_2330174780 Alkaloid IO medium borderline
Mhamcontig_2340177340 Alkaloid IO low borderline
Mhamcontig_2450194190 Alkaloid IO medium pass
Mhamcontig_420216890 Alkaloid IO medium borderline
Mhamcontig_1040006270 Alkaloid ISY medium pass
Mhamcontig_1440067460 Alkaloid ISY medium pass
Mhamcontig_430217860 Alkaloid ISY low borderline
Mhamcontig_430217870 Alkaloid ISY medium pass
Mhamcontig_430217990 Alkaloid ISY low borderline
Mhamcontig_430218000 Alkaloid ISY medium pass
Mhamcontig_430218170 Alkaloid ISY medium pass
Mhamcontig_430218180 Alkaloid ISY medium pass
Mhamcontig_1810117460 Alkaloid LAMT medium borderline
Mhamcontig_2110152470 Alkaloid LAMT medium borderline
Mhamcontig_60231650 Alkaloid MPO high pass
Mhamcontig_710261330 Alkaloid MPO high pass
Mhamcontig_1350057010 Alkaloid NCS medium borderline
Mhamcontig_1350057020 Alkaloid NCS medium borderline
Mhamcontig_2020145760 Alkaloid NCS medium borderline
Mhamcontig_590227140 Alkaloid NCS medium borderline
Mhamcontig_90279800 Alkaloid NCS medium borderline
Mhamcontig_1050006670 Alkaloid NMT medium pass