PlantSME Plant secondary metabolism enzyme database

Leucobryum bowringii (leucobryum_bowringii)

Imported from atlas release summary for Leucobryum bowringii.

694
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 184 10 POD (78) View species results
Terpenoid pathway 155 19 BAHD (59) View species results
Alkaloid pathway 141 17 NMT (27) View species results
Flavonoid pathway 88 10 UFGT (25) View species results
Rosmarinic acid pathway 80 7 C4H (38) View species results
Steroid pathway 46 12 CAS (16) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 878 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 116 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Gene Pathway Family Confidence Status
Lbowcontig_10009300 Alkaloid 16OMT medium borderline
Lbowcontig_10009380 Alkaloid 16OMT medium borderline
Lbowcontig_10011030 Alkaloid 16OMT medium borderline
Lbowcontig_120053850 Alkaloid 16OMT medium borderline
Lbowcontig_120078530 Alkaloid 16OMT medium borderline
Lbowcontig_120078570 Alkaloid 16OMT medium borderline
Lbowcontig_160125580 Alkaloid 16OMT medium borderline
Lbowcontig_190158040 Alkaloid 16OMT medium borderline
Lbowcontig_40243100 Alkaloid 16OMT medium borderline
Lbowcontig_40243120 Alkaloid 16OMT medium borderline
Lbowcontig_80339930 Alkaloid 16OMT medium borderline
Lbowcontig_80339940 Alkaloid 16OMT medium borderline
Lbowcontig_80339960 Alkaloid 16OMT medium borderline
Lbowcontig_150108540 Alkaloid 6OMT_4OMT_SOMT medium borderline
Lbowcontig_170149500 Alkaloid 6OMT_4OMT_SOMT low borderline
Lbowcontig_80337680 Alkaloid 6OMT_4OMT_SOMT low borderline
Lbowcontig_100032540 Alkaloid 7DLGT medium pass
Lbowcontig_100037830 Alkaloid 7DLGT low borderline
Lbowcontig_10006680 Alkaloid 7DLGT low borderline
Lbowcontig_120056940 Alkaloid 7DLGT medium pass
Lbowcontig_120071090 Alkaloid 7DLGT low borderline
Lbowcontig_120087690 Alkaloid 7DLGT low borderline
Lbowcontig_160117660 Alkaloid 7DLGT low borderline
Lbowcontig_200180290 Alkaloid 7DLGT medium pass
Lbowcontig_200180300 Alkaloid 7DLGT medium pass
Lbowcontig_200180800 Alkaloid 7DLGT medium pass
Lbowcontig_200183140 Alkaloid 7DLGT low borderline
Lbowcontig_200184610 Alkaloid 7DLGT medium pass
Lbowcontig_200188140 Alkaloid 7DLGT medium pass
Lbowcontig_200206530 Alkaloid 7DLGT low borderline
Lbowcontig_50265340 Alkaloid 7DLGT low borderline
Lbowcontig_50275950 Alkaloid 7DLGT medium pass
Lbowcontig_50280880 Alkaloid 7DLGT low borderline
Lbowcontig_50280920 Alkaloid 7DLGT low borderline
Lbowcontig_60301000 Alkaloid 7DLGT high pass
Lbowcontig_60302290 Alkaloid 7DLGT low borderline
Lbowcontig_60319500 Alkaloid 7DLGT low borderline
Lbowcontig_60319540 Alkaloid 7DLGT low borderline
Lbowcontig_80324200 Alkaloid 7DLGT low borderline
Lbowcontig_80339770 Alkaloid 7DLGT low borderline
Lbowcontig_90358130 Alkaloid 7DLGT low borderline
Lbowcontig_90362650 Alkaloid 7DLGT low borderline
Lbowcontig_90362660 Alkaloid 7DLGT low borderline
Lbowcontig_110044690 Alkaloid 7DLH medium borderline
Lbowcontig_120065630 Alkaloid 7DLH medium borderline
Lbowcontig_120069070 Alkaloid 7DLH medium borderline
Lbowcontig_120087200 Alkaloid 7DLH medium borderline
Lbowcontig_160124500 Alkaloid 7DLH low borderline
Lbowcontig_50282940 Alkaloid 7DLH medium borderline
Lbowcontig_60310790 Alkaloid 7DLH medium borderline