Leucobryum bowringii (leucobryum_bowringii)

This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.

Pathway Coverage

6 Pathways

Phenylpropanoid pathway 26.51% Terpenoid pathway 22.33% Alkaloid pathway 20.32% Flavonoid pathway 12.68% Rosmarinic acid pathway 11.53% Steroid pathway 6.63%

Family Distribution

694 Candidate Genes

C4H 7.52% C3'H/CYP98A 6.86% CYP76 5.81% BAHD 4.71% 4CL 4.56% POD 4.21% IFS 4.11% NMT 3.46%

Other Families 58.77%

More Families (95)

BR6OX2/CYP85A2 59 2.96% DWF4/CYP90B1 52 2.61% T3O 51 2.56% STR 45 2.25% PAL 45 2.25% IO 44 2.2% F3H 43 2.15% IFR 40 2.0% F3'H/CYP75B 39 1.95% CODM/T6ODM 34 1.7% PYKS 31 1.55% GS 30 1.5% UGT 30 1.5% UFGT 29 1.45% 7DLGT 27 1.35% SMT1/SMT2/SMT3 24 1.2% LAC 23 1.15% COMT 22 1.1% G8O/G8H 21 1.05% T16H 21 1.05% CHS 20 1.0% F3'5'H/CYP75A 20 1.0% CAD 19 0.95% CAS 18 0.9% TRI/TRII 17 0.85% CSE 16 0.8% CYP71 15 0.75% SGD 14 0.7% SLS 13 0.65% 16OMT 13 0.65% FNS 13 0.65% CNMT 12 0.6% LAMT 12 0.6% H6H 12 0.6% HCT 11 0.55% RAS 11 0.55% CPD/CYP90A1 9 0.45% 8HGO 8 0.4% COR 8 0.4% NCS 8 0.4% CYP51G1 8 0.4% SQS/FDFT1 8 0.4% AACT 8 0.4% 7DLH 7 0.35% CYP80B1 7 0.35% ANR 7 0.35% DET2 7 0.35% F5H/CYP84A 6 0.3% BR6OX1/CYP85A1 6 0.3% CYP90D1 6 0.3% BBE 5 0.25% PMT 5 0.25% TDC 5 0.25% CCR 5 0.25% TAT 5 0.25% ROT3/CYP90C1 5 0.25% DWF5 5 0.25% FPPS 5 0.25% MVK 5 0.25% CYP719 4 0.2% MPO 4 0.2% DFR 4 0.2% CHI 4 0.2% ANS/LDOX 4 0.2% CPR 4 0.2% TPS 4 0.2% GGPPS 4 0.2% GES 3 0.15% ISY 3 0.15% 6OMT_4OMT_SOMT 3 0.15% ADC 3 0.15% HPPR 3 0.15% SQE 3 0.15% CCoAOMT 2 0.1% SMO1/SMO2 2 0.1% MCT/IspD 2 0.1% MVD 2 0.1% HMGS 2 0.1% HDS/IspG 2 0.1% DXS 2 0.1% TYDC_DDC 1 0.05% FLS 1 0.05% HYD1 1 0.05% DWF1 1 0.05% FK 1 0.05% CPI1 1 0.05% DWF7 1 0.05% MDS/IspF 1 0.05% PMK 1 0.05% DXR 1 0.05% CMK/IspE 1 0.05% GPPS 1 0.05% IDI 1 0.05% HDR/IspH 1 0.05% HMGR 1 0.05%

Species Pathway Results

The links below show identification results for this species within each pathway, instead of opening the global pathway overview.

Pathway	Candidate Genes	Families	Top family	Results
Phenylpropanoid pathway	184	10	POD (78)	View species results
Terpenoid pathway	155	19	BAHD (59)	View species results
Alkaloid pathway	141	17	NMT (27)	View species results
Flavonoid pathway	88	10	UFGT (25)	View species results
Rosmarinic acid pathway	80	7	C4H (38)	View species results
Steroid pathway	46	12	CAS (16)	View species results

Broad Catalytic Groups

P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.

Catalytic group	Families	Candidate genes	Included families
P450/oxygenase	23	878	7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase	3	116	BAHD, HCT, RAS

Identification Result List

Search the public identification results for this species; click pathway or family legends above to narrow within this species.

Current family filter: SMT1/SMT2/SMT3

Gene	Pathway	Family	Confidence	Status	Best Target
Lbowcontig_100024990	Steroid	SMT1/SMT2/SMT3	low	borderline	SMT1_SMT2_SMT3__00005__sp_Q8RUW5_SCP8_ARATH
Lbowcontig_100032160	Steroid	SMT1/SMT2/SMT3	medium	pass	SMT1_SMT2_SMT3__00004__sp_Q4VNK0_SMTA_BRAOT
Lbowcontig_10010100	Steroid	SMT1/SMT2/SMT3	low	borderline	SMT1_SMT2_SMT3__00005__sp_Q8RUW5_SCP8_ARATH
Lbowcontig_120059220	Steroid	SMT1/SMT2/SMT3	medium	pass	SMT1_SMT2_SMT3__00005__sp_Q8RUW5_SCP8_ARATH
Lbowcontig_120060510	Steroid	SMT1/SMT2/SMT3	low	borderline	SMT1_SMT2_SMT3__00006__sp_Q9LM02_SMT1_ARATH
Lbowcontig_140096670	Steroid	SMT1/SMT2/SMT3	low	borderline	SMT1_SMT2_SMT3__00005__sp_Q8RUW5_SCP8_ARATH
Lbowcontig_140096700	Steroid	SMT1/SMT2/SMT3	low	borderline	SMT1_SMT2_SMT3__00005__sp_Q8RUW5_SCP8_ARATH
Lbowcontig_140100980	Steroid	SMT1/SMT2/SMT3	medium	pass	SMT1_SMT2_SMT3__00005__sp_Q8RUW5_SCP8_ARATH
Lbowcontig_150104700	Steroid	SMT1/SMT2/SMT3	low	borderline	SMT1_SMT2_SMT3__00005__sp_Q8RUW5_SCP8_ARATH
Lbowcontig_150106530	Steroid	SMT1/SMT2/SMT3	medium	pass	SMT1_SMT2_SMT3__00005__sp_Q8RUW5_SCP8_ARATH
Lbowcontig_150111720	Steroid	SMT1/SMT2/SMT3	medium	pass	SMT1_SMT2_SMT3__00006__sp_Q9LM02_SMT1_ARATH
Lbowcontig_160125300	Steroid	SMT1/SMT2/SMT3	low	borderline	SMT1_SMT2_SMT3__00005__sp_Q8RUW5_SCP8_ARATH
Lbowcontig_160126070	Steroid	SMT1/SMT2/SMT3	low	borderline	SMT1_SMT2_SMT3__00005__sp_Q8RUW5_SCP8_ARATH
Lbowcontig_160138820	Steroid	SMT1/SMT2/SMT3	low	borderline	SMT1_SMT2_SMT3__00001__sp_H2E7T8_SMTL1_BOTBR
Lbowcontig_170148840	Steroid	SMT1/SMT2/SMT3	low	borderline	SMT1_SMT2_SMT3__00005__sp_Q8RUW5_SCP8_ARATH
Lbowcontig_190158700	Steroid	SMT1/SMT2/SMT3	low	borderline	SMT1_SMT2_SMT3__00005__sp_Q8RUW5_SCP8_ARATH
Lbowcontig_200192040	Steroid	SMT1/SMT2/SMT3	medium	pass	SMT1_SMT2_SMT3__00005__sp_Q8RUW5_SCP8_ARATH
Lbowcontig_200210580	Steroid	SMT1/SMT2/SMT3	low	borderline	SMT1_SMT2_SMT3__00006__sp_Q9LM02_SMT1_ARATH
Lbowcontig_40251000	Steroid	SMT1/SMT2/SMT3	low	borderline	SMT1_SMT2_SMT3__00005__sp_Q8RUW5_SCP8_ARATH
Lbowcontig_40252200	Steroid	SMT1/SMT2/SMT3	medium	pass	SMT1_SMT2_SMT3__00006__sp_Q9LM02_SMT1_ARATH
Lbowcontig_40252230	Steroid	SMT1/SMT2/SMT3	medium	pass	SMT1_SMT2_SMT3__00006__sp_Q9LM02_SMT1_ARATH
Lbowcontig_60302130	Steroid	SMT1/SMT2/SMT3	low	borderline	SMT1_SMT2_SMT3__00005__sp_Q8RUW5_SCP8_ARATH
Lbowcontig_60321060	Steroid	SMT1/SMT2/SMT3	low	borderline	SMT1_SMT2_SMT3__00005__sp_Q8RUW5_SCP8_ARATH
Lbowcontig_90364560	Steroid	SMT1/SMT2/SMT3	medium	pass	SMT1_SMT2_SMT3__00006__sp_Q9LM02_SMT1_ARATH