PlantSME Plant secondary metabolism enzyme database

Leucobryum bowringii (leucobryum_bowringii)

Imported from atlas release summary for Leucobryum bowringii.

694
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 184 10 POD (78) View species results
Terpenoid pathway 155 19 BAHD (59) View species results
Alkaloid pathway 141 17 NMT (27) View species results
Flavonoid pathway 88 10 UFGT (25) View species results
Rosmarinic acid pathway 80 7 C4H (38) View species results
Steroid pathway 46 12 CAS (16) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 878 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 116 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: T3O
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Gene Pathway Family Confidence Status
Lbowcontig_100019570 Alkaloid T3O medium borderline
Lbowcontig_100020220 Alkaloid T3O medium borderline
Lbowcontig_100025220 Alkaloid T3O low borderline
Lbowcontig_100037250 Alkaloid T3O medium borderline
Lbowcontig_10009100 Alkaloid T3O medium borderline
Lbowcontig_10016140 Alkaloid T3O low borderline
Lbowcontig_120054700 Alkaloid T3O medium borderline
Lbowcontig_120065090 Alkaloid T3O medium pass
Lbowcontig_120068290 Alkaloid T3O medium borderline
Lbowcontig_120068300 Alkaloid T3O medium pass
Lbowcontig_120068310 Alkaloid T3O low borderline
Lbowcontig_120069130 Alkaloid T3O medium borderline
Lbowcontig_120069180 Alkaloid T3O medium borderline
Lbowcontig_120069580 Alkaloid T3O medium borderline
Lbowcontig_120069680 Alkaloid T3O medium borderline
Lbowcontig_120069710 Alkaloid T3O medium borderline
Lbowcontig_120077130 Alkaloid T3O medium borderline
Lbowcontig_120077400 Alkaloid T3O medium borderline
Lbowcontig_120084690 Alkaloid T3O medium borderline
Lbowcontig_120086820 Alkaloid T3O medium borderline
Lbowcontig_120087380 Alkaloid T3O medium pass
Lbowcontig_150105530 Alkaloid T3O medium pass
Lbowcontig_150105550 Alkaloid T3O medium pass
Lbowcontig_200180930 Alkaloid T3O medium pass
Lbowcontig_200196810 Alkaloid T3O medium borderline
Lbowcontig_200197940 Alkaloid T3O medium pass
Lbowcontig_220214270 Alkaloid T3O medium borderline
Lbowcontig_220218790 Alkaloid T3O medium borderline
Lbowcontig_40246080 Alkaloid T3O medium pass
Lbowcontig_40249040 Alkaloid T3O medium pass
Lbowcontig_40250350 Alkaloid T3O medium pass
Lbowcontig_40252870 Alkaloid T3O medium pass
Lbowcontig_40256060 Alkaloid T3O medium pass
Lbowcontig_50275340 Alkaloid T3O medium borderline
Lbowcontig_50277590 Alkaloid T3O low borderline
Lbowcontig_60293180 Alkaloid T3O medium borderline
Lbowcontig_60298530 Alkaloid T3O medium borderline
Lbowcontig_60298590 Alkaloid T3O medium borderline
Lbowcontig_60301650 Alkaloid T3O medium borderline
Lbowcontig_60301670 Alkaloid T3O medium borderline
Lbowcontig_60301710 Alkaloid T3O medium borderline
Lbowcontig_60305280 Alkaloid T3O medium borderline
Lbowcontig_60316560 Alkaloid T3O low borderline
Lbowcontig_60318260 Alkaloid T3O medium pass
Lbowcontig_60318960 Alkaloid T3O medium borderline
Lbowcontig_60322460 Alkaloid T3O medium pass
Lbowcontig_60323570 Alkaloid T3O low borderline
Lbowcontig_80325310 Alkaloid T3O medium borderline
Lbowcontig_80342570 Alkaloid T3O medium pass
Lbowcontig_80344110 Alkaloid T3O medium borderline