PlantSME Plant secondary metabolism enzyme database

Syntrichia ruralis (syntrichia_ruralis)

Imported from atlas release summary for Syntrichia ruralis.

1236
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 319 20 BAHD (105) View species results
Phenylpropanoid pathway 317 11 POD (139) View species results
Alkaloid pathway 245 17 NMT (47) View species results
Flavonoid pathway 160 11 UFGT (55) View species results
Rosmarinic acid pathway 124 7 C4H (42) View species results
Steroid pathway 71 12 CAS (28) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1403 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 186 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Gene Pathway Family Confidence Status
Srurcontig_10840037910 Alkaloid 16OMT medium borderline
Srurcontig_11120050450 Alkaloid 16OMT medium borderline
Srurcontig_3350163570 Alkaloid 16OMT medium borderline
Srurcontig_3350163690 Alkaloid 16OMT medium borderline
Srurcontig_3910196070 Alkaloid 16OMT medium borderline
Srurcontig_7030351950 Alkaloid 16OMT medium borderline
Srurcontig_7560376810 Alkaloid 16OMT medium borderline
Srurcontig_7590386530 Alkaloid 16OMT medium borderline
Srurcontig_8180420430 Alkaloid 16OMT medium borderline
Srurcontig_8900455180 Alkaloid 16OMT medium borderline
Srurcontig_9790496130 Alkaloid 16OMT medium borderline
Srurcontig_11120050410 Alkaloid 6OMT_4OMT_SOMT medium borderline
Srurcontig_2460121720 Alkaloid 6OMT_4OMT_SOMT low borderline
Srurcontig_6530335900 Alkaloid 6OMT_4OMT_SOMT low borderline
Srurcontig_10110008790 Alkaloid 7DLGT medium pass
Srurcontig_10220012970 Alkaloid 7DLGT low borderline
Srurcontig_10320017080 Alkaloid 7DLGT low borderline
Srurcontig_10610024000 Alkaloid 7DLGT low borderline
Srurcontig_1080036850 Alkaloid 7DLGT medium pass
Srurcontig_1080037250 Alkaloid 7DLGT high pass
Srurcontig_11050046640 Alkaloid 7DLGT low borderline
Srurcontig_11120051710 Alkaloid 7DLGT medium pass
Srurcontig_11120051720 Alkaloid 7DLGT medium pass
Srurcontig_1340070530 Alkaloid 7DLGT medium pass
Srurcontig_1420073050 Alkaloid 7DLGT medium pass
Srurcontig_1600079360 Alkaloid 7DLGT medium pass
Srurcontig_1780085140 Alkaloid 7DLGT medium pass
Srurcontig_1780085150 Alkaloid 7DLGT medium pass
Srurcontig_1830088430 Alkaloid 7DLGT medium pass
Srurcontig_2400117160 Alkaloid 7DLGT medium pass
Srurcontig_2470122240 Alkaloid 7DLGT low borderline
Srurcontig_2470122310 Alkaloid 7DLGT low borderline
Srurcontig_3070146850 Alkaloid 7DLGT medium pass
Srurcontig_3070146980 Alkaloid 7DLGT medium pass
Srurcontig_3080147850 Alkaloid 7DLGT medium pass
Srurcontig_3690179470 Alkaloid 7DLGT low borderline
Srurcontig_3780184160 Alkaloid 7DLGT low borderline
Srurcontig_470235700 Alkaloid 7DLGT low borderline
Srurcontig_4750238500 Alkaloid 7DLGT low borderline
Srurcontig_4920243850 Alkaloid 7DLGT medium pass
Srurcontig_4920243930 Alkaloid 7DLGT medium pass
Srurcontig_4920243940 Alkaloid 7DLGT medium pass
Srurcontig_5080248630 Alkaloid 7DLGT low borderline
Srurcontig_5500277680 Alkaloid 7DLGT medium pass
Srurcontig_5500277690 Alkaloid 7DLGT medium pass
Srurcontig_5660289450 Alkaloid 7DLGT low borderline
Srurcontig_5660289500 Alkaloid 7DLGT low borderline
Srurcontig_5660290640 Alkaloid 7DLGT low borderline
Srurcontig_5820297830 Alkaloid 7DLGT low borderline
Srurcontig_6160309910 Alkaloid 7DLGT high pass