PlantSME Plant secondary metabolism enzyme database

Syntrichia ruralis (syntrichia_ruralis)

Imported from atlas release summary for Syntrichia ruralis.

1236
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 319 20 BAHD (105) View species results
Phenylpropanoid pathway 317 11 POD (139) View species results
Alkaloid pathway 245 17 NMT (47) View species results
Flavonoid pathway 160 11 UFGT (55) View species results
Rosmarinic acid pathway 124 7 C4H (42) View species results
Steroid pathway 71 12 CAS (28) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1403 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 186 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: F3H
Reset
Gene Pathway Family Confidence Status
Srurcontig_10370017750 Flavonoid F3H low borderline
Srurcontig_10370017790 Flavonoid F3H medium borderline
Srurcontig_10880039630 Flavonoid F3H medium borderline
Srurcontig_10880039930 Flavonoid F3H low borderline
Srurcontig_10950043090 Flavonoid F3H medium borderline
Srurcontig_10960043970 Flavonoid F3H medium borderline
Srurcontig_11070046930 Flavonoid F3H low borderline
Srurcontig_1610079590 Flavonoid F3H medium borderline
Srurcontig_1700082810 Flavonoid F3H low borderline
Srurcontig_1710083420 Flavonoid F3H medium borderline
Srurcontig_1980095920 Flavonoid F3H medium borderline
Srurcontig_1980095930 Flavonoid F3H medium borderline
Srurcontig_220109350 Flavonoid F3H low borderline
Srurcontig_2290113280 Flavonoid F3H low borderline
Srurcontig_2530123750 Flavonoid F3H medium borderline
Srurcontig_2560124770 Flavonoid F3H medium borderline
Srurcontig_3120150430 Flavonoid F3H medium borderline
Srurcontig_3180152260 Flavonoid F3H medium borderline
Srurcontig_330159160 Flavonoid F3H medium borderline
Srurcontig_3890187850 Flavonoid F3H medium borderline
Srurcontig_3890187890 Flavonoid F3H low borderline
Srurcontig_3910196930 Flavonoid F3H low borderline
Srurcontig_4310211080 Flavonoid F3H medium borderline
Srurcontig_4310211090 Flavonoid F3H medium borderline
Srurcontig_4390218040 Flavonoid F3H low borderline
Srurcontig_4570227250 Flavonoid F3H low borderline
Srurcontig_4570229470 Flavonoid F3H medium borderline
Srurcontig_4690235610 Flavonoid F3H medium borderline
Srurcontig_5350263760 Flavonoid F3H low borderline
Srurcontig_5440275260 Flavonoid F3H low borderline
Srurcontig_5930300760 Flavonoid F3H low borderline
Srurcontig_6160310010 Flavonoid F3H medium borderline
Srurcontig_6290318470 Flavonoid F3H medium borderline
Srurcontig_630321260 Flavonoid F3H medium borderline
Srurcontig_6330324680 Flavonoid F3H medium borderline
Srurcontig_660339130 Flavonoid F3H medium borderline
Srurcontig_6860347440 Flavonoid F3H low borderline
Srurcontig_7170357170 Flavonoid F3H medium borderline
Srurcontig_7570380040 Flavonoid F3H medium borderline
Srurcontig_8040411930 Flavonoid F3H low borderline
Srurcontig_8040411940 Flavonoid F3H low borderline
Srurcontig_8140418260 Flavonoid F3H low borderline
Srurcontig_8510436920 Flavonoid F3H low borderline
Srurcontig_8760449630 Flavonoid F3H medium borderline
Srurcontig_8840452220 Flavonoid F3H medium borderline
Srurcontig_9010461790 Flavonoid F3H medium borderline
Srurcontig_9020462330 Flavonoid F3H medium borderline
Srurcontig_9760493040 Flavonoid F3H medium borderline
Srurcontig_9870499530 Flavonoid F3H medium borderline