PlantSME Plant secondary metabolism enzyme database

Syntrichia ruralis (syntrichia_ruralis)

Imported from atlas release summary for Syntrichia ruralis.

1236
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 319 20 BAHD (105) View species results
Phenylpropanoid pathway 317 11 POD (139) View species results
Alkaloid pathway 245 17 NMT (47) View species results
Flavonoid pathway 160 11 UFGT (55) View species results
Rosmarinic acid pathway 124 7 C4H (42) View species results
Steroid pathway 71 12 CAS (28) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1403 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 186 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: PYKS
Reset
Gene Pathway Family Confidence Status
Srurcontig_10080006350 Alkaloid PYKS high pass
Srurcontig_10390018480 Alkaloid PYKS high pass
Srurcontig_10390018520 Alkaloid PYKS high pass
Srurcontig_10390018580 Alkaloid PYKS high pass
Srurcontig_10390018670 Alkaloid PYKS high pass
Srurcontig_10390018790 Alkaloid PYKS high pass
Srurcontig_2030100290 Alkaloid PYKS medium pass
Srurcontig_2280112270 Alkaloid PYKS high pass
Srurcontig_240116940 Alkaloid PYKS high pass
Srurcontig_2750133430 Alkaloid PYKS medium pass
Srurcontig_3010142470 Alkaloid PYKS low borderline
Srurcontig_30141950 Alkaloid PYKS high pass
Srurcontig_30141970 Alkaloid PYKS high pass
Srurcontig_310149440 Alkaloid PYKS low borderline
Srurcontig_3270157380 Alkaloid PYKS low borderline
Srurcontig_3350160850 Alkaloid PYKS low borderline
Srurcontig_3520173420 Alkaloid PYKS low borderline
Srurcontig_3690179140 Alkaloid PYKS low borderline
Srurcontig_370179930 Alkaloid PYKS high pass
Srurcontig_3910193520 Alkaloid PYKS medium pass
Srurcontig_4010200380 Alkaloid PYKS high pass
Srurcontig_470235820 Alkaloid PYKS low borderline
Srurcontig_5130254260 Alkaloid PYKS low borderline
Srurcontig_5390267740 Alkaloid PYKS low borderline
Srurcontig_5710293260 Alkaloid PYKS low borderline
Srurcontig_6290318130 Alkaloid PYKS high pass
Srurcontig_710354700 Alkaloid PYKS high pass
Srurcontig_7240358730 Alkaloid PYKS low borderline
Srurcontig_7560374760 Alkaloid PYKS low borderline
Srurcontig_7590385390 Alkaloid PYKS high pass
Srurcontig_7590385980 Alkaloid PYKS low borderline
Srurcontig_7600390370 Alkaloid PYKS high pass
Srurcontig_7760394960 Alkaloid PYKS high pass
Srurcontig_7760394980 Alkaloid PYKS high pass
Srurcontig_8000409270 Alkaloid PYKS high pass
Srurcontig_8110416690 Alkaloid PYKS high pass
Srurcontig_8110416700 Alkaloid PYKS high pass
Srurcontig_8110416710 Alkaloid PYKS high pass
Srurcontig_8110416720 Alkaloid PYKS high pass
Srurcontig_8470430540 Alkaloid PYKS high pass
Srurcontig_8480433340 Alkaloid PYKS high pass
Srurcontig_9540484440 Alkaloid PYKS high pass
Srurcontig_9540484450 Alkaloid PYKS high pass
Srurcontig_9540484460 Alkaloid PYKS high pass
Srurcontig_9790495670 Alkaloid PYKS low borderline
Srurcontig_9870498540 Alkaloid PYKS low borderline