PlantSME Plant secondary metabolism enzyme database

Syntrichia ruralis (syntrichia_ruralis)

Imported from atlas release summary for Syntrichia ruralis.

1236
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 319 20 BAHD (105) View species results
Phenylpropanoid pathway 317 11 POD (139) View species results
Alkaloid pathway 245 17 NMT (47) View species results
Flavonoid pathway 160 11 UFGT (55) View species results
Rosmarinic acid pathway 124 7 C4H (42) View species results
Steroid pathway 71 12 CAS (28) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1403 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 186 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: IO
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Gene Pathway Family Confidence Status
Srurcontig_10040003900 Alkaloid IO low borderline
Srurcontig_10320017120 Alkaloid IO medium borderline
Srurcontig_10490021830 Alkaloid IO medium borderline
Srurcontig_10870039400 Alkaloid IO medium borderline
Srurcontig_10960043480 Alkaloid IO medium borderline
Srurcontig_130068550 Alkaloid IO medium borderline
Srurcontig_1420075310 Alkaloid IO medium borderline
Srurcontig_1730084250 Alkaloid IO medium borderline
Srurcontig_1790085380 Alkaloid IO medium borderline
Srurcontig_1900092610 Alkaloid IO medium borderline
Srurcontig_2140108350 Alkaloid IO medium borderline
Srurcontig_2140108450 Alkaloid IO medium borderline
Srurcontig_2140108460 Alkaloid IO medium borderline
Srurcontig_2340115470 Alkaloid IO medium borderline
Srurcontig_2710129680 Alkaloid IO low borderline
Srurcontig_2710131080 Alkaloid IO medium borderline
Srurcontig_2930138070 Alkaloid IO medium borderline
Srurcontig_3040143390 Alkaloid IO medium borderline
Srurcontig_3080147930 Alkaloid IO medium borderline
Srurcontig_3320159950 Alkaloid IO medium borderline
Srurcontig_3490170920 Alkaloid IO medium borderline
Srurcontig_3490170960 Alkaloid IO medium borderline
Srurcontig_3890189140 Alkaloid IO medium borderline
Srurcontig_4190207160 Alkaloid IO medium borderline
Srurcontig_4390217510 Alkaloid IO medium borderline
Srurcontig_4500224200 Alkaloid IO medium borderline
Srurcontig_4570228550 Alkaloid IO medium borderline
Srurcontig_5080250860 Alkaloid IO medium borderline
Srurcontig_5410271050 Alkaloid IO medium borderline
Srurcontig_5500277490 Alkaloid IO medium borderline
Srurcontig_5590285780 Alkaloid IO medium borderline
Srurcontig_5640288600 Alkaloid IO medium borderline
Srurcontig_5820297900 Alkaloid IO low borderline
Srurcontig_6080306510 Alkaloid IO medium borderline
Srurcontig_6120308450 Alkaloid IO medium borderline
Srurcontig_6580337720 Alkaloid IO medium borderline
Srurcontig_6610340210 Alkaloid IO medium borderline
Srurcontig_7260359320 Alkaloid IO medium borderline
Srurcontig_7460366330 Alkaloid IO medium borderline
Srurcontig_7550372770 Alkaloid IO medium borderline
Srurcontig_7590387170 Alkaloid IO medium borderline
Srurcontig_7590387190 Alkaloid IO medium borderline
Srurcontig_7590387200 Alkaloid IO medium borderline
Srurcontig_7600389840 Alkaloid IO medium borderline
Srurcontig_7600389870 Alkaloid IO medium borderline
Srurcontig_7830398780 Alkaloid IO medium borderline
Srurcontig_7870402120 Alkaloid IO medium borderline
Srurcontig_7920405560 Alkaloid IO medium borderline
Srurcontig_7990407850 Alkaloid IO medium borderline
Srurcontig_8040411570 Alkaloid IO medium borderline