PlantSME Plant secondary metabolism enzyme database

Syntrichia ruralis (syntrichia_ruralis)

Imported from atlas release summary for Syntrichia ruralis.

1236
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 319 20 BAHD (105) View species results
Phenylpropanoid pathway 317 11 POD (139) View species results
Alkaloid pathway 245 17 NMT (47) View species results
Flavonoid pathway 160 11 UFGT (55) View species results
Rosmarinic acid pathway 124 7 C4H (42) View species results
Steroid pathway 71 12 CAS (28) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1403 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 186 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Rosmarinic acid pathway
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Gene Pathway Family Confidence Status
Srurcontig_10050004830 Rosmarinic Acid 4CL low borderline
Srurcontig_1030016270 Rosmarinic Acid 4CL medium pass
Srurcontig_10630024900 Rosmarinic Acid 4CL medium pass
Srurcontig_11170053190 Rosmarinic Acid 4CL medium pass
Srurcontig_1870089610 Rosmarinic Acid 4CL medium pass
Srurcontig_1980097960 Rosmarinic Acid 4CL medium pass
Srurcontig_1980097970 Rosmarinic Acid 4CL medium pass
Srurcontig_2130107790 Rosmarinic Acid 4CL medium pass
Srurcontig_2170108960 Rosmarinic Acid 4CL low borderline
Srurcontig_2890136820 Rosmarinic Acid 4CL low borderline
Srurcontig_3420167920 Rosmarinic Acid 4CL low borderline
Srurcontig_3490170230 Rosmarinic Acid 4CL low borderline
Srurcontig_4130204570 Rosmarinic Acid 4CL medium pass
Srurcontig_4130204630 Rosmarinic Acid 4CL medium pass
Srurcontig_4130204670 Rosmarinic Acid 4CL low borderline
Srurcontig_4130204680 Rosmarinic Acid 4CL medium pass
Srurcontig_4390217670 Rosmarinic Acid 4CL low borderline
Srurcontig_4710237480 Rosmarinic Acid 4CL low borderline
Srurcontig_4750238810 Rosmarinic Acid 4CL low borderline
Srurcontig_5350264360 Rosmarinic Acid 4CL low borderline
Srurcontig_5430273150 Rosmarinic Acid 4CL low borderline
Srurcontig_5530281910 Rosmarinic Acid 4CL low borderline
Srurcontig_5560284530 Rosmarinic Acid 4CL medium pass
Srurcontig_5560284550 Rosmarinic Acid 4CL medium pass
Srurcontig_5560284580 Rosmarinic Acid 4CL medium pass
Srurcontig_5560284590 Rosmarinic Acid 4CL medium pass
Srurcontig_5560284650 Rosmarinic Acid 4CL medium pass
Srurcontig_5560284660 Rosmarinic Acid 4CL medium pass
Srurcontig_5660289400 Rosmarinic Acid 4CL low borderline
Srurcontig_5790296900 Rosmarinic Acid 4CL medium pass
Srurcontig_5810297500 Rosmarinic Acid 4CL low borderline
Srurcontig_600303150 Rosmarinic Acid 4CL medium pass
Srurcontig_6290317590 Rosmarinic Acid 4CL medium pass
Srurcontig_6290319680 Rosmarinic Acid 4CL medium pass
Srurcontig_6330323400 Rosmarinic Acid 4CL low borderline
Srurcontig_6330324670 Rosmarinic Acid 4CL medium pass
Srurcontig_6510332760 Rosmarinic Acid 4CL low borderline
Srurcontig_7600390140 Rosmarinic Acid 4CL medium pass
Srurcontig_8070413580 Rosmarinic Acid 4CL medium pass
Srurcontig_8140418490 Rosmarinic Acid 4CL medium pass
Srurcontig_8270423390 Rosmarinic Acid 4CL low borderline
Srurcontig_8550439240 Rosmarinic Acid 4CL low borderline
Srurcontig_8880453410 Rosmarinic Acid 4CL medium pass
Srurcontig_90458990 Rosmarinic Acid 4CL medium pass
Srurcontig_9670487900 Rosmarinic Acid 4CL medium pass
Srurcontig_9870498320 Rosmarinic Acid 4CL medium pass
Srurcontig_9920501380 Rosmarinic Acid 4CL medium pass
Srurcontig_9960503360 Rosmarinic Acid 4CL medium pass
Srurcontig_10030002970 Rosmarinic Acid C4H medium pass
Srurcontig_10090008040 Rosmarinic Acid C4H low borderline