PlantSME Plant secondary metabolism enzyme database

Archidium alternifolium (archidium_alternifolium)

Imported from atlas release summary for Archidium alternifolium.

891
Candidate Genes
102
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (94)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 259 11 POD (97) View species results
Terpenoid pathway 190 20 BAHD (58) View species results
Alkaloid pathway 161 19 PYKS (29) View species results
Flavonoid pathway 135 10 PAL (38) View species results
Rosmarinic acid pathway 95 7 PAL (38) View species results
Steroid pathway 51 12 CAS (20) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 897 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 126 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Gene Pathway Family Confidence Status
Aaltescaffold_100115750 Alkaloid 16OMT medium borderline
Aaltescaffold_10032330 Alkaloid 16OMT medium borderline
Aaltescaffold_10032340 Alkaloid 16OMT medium borderline
Aaltescaffold_10033230 Alkaloid 16OMT medium borderline
Aaltescaffold_10033240 Alkaloid 16OMT medium borderline
Aaltescaffold_10033410 Alkaloid 16OMT medium borderline
Aaltescaffold_20185880 Alkaloid 16OMT medium borderline
Aaltescaffold_20186870 Alkaloid 16OMT medium borderline
Aaltescaffold_20186990 Alkaloid 16OMT medium borderline
Aaltescaffold_20187130 Alkaloid 16OMT medium borderline
Aaltescaffold_20187140 Alkaloid 16OMT medium borderline
Aaltescaffold_20187150 Alkaloid 16OMT medium borderline
Aaltescaffold_20187260 Alkaloid 16OMT medium borderline
Aaltescaffold_20196090 Alkaloid 16OMT medium borderline
Aaltescaffold_20210150 Alkaloid 16OMT medium borderline
Aaltescaffold_20210160 Alkaloid 16OMT medium borderline
Aaltescaffold_40329390 Alkaloid 16OMT medium borderline
Aaltescaffold_40340720 Alkaloid 16OMT medium borderline
Aaltescaffold_40340750 Alkaloid 16OMT medium borderline
Aaltescaffold_60423450 Alkaloid 16OMT medium borderline
Aaltescaffold_60423670 Alkaloid 16OMT medium borderline
Aaltescaffold_60429630 Alkaloid 16OMT medium borderline
Aaltescaffold_60433220 Alkaloid 16OMT medium borderline
Aaltescaffold_60433670 Alkaloid 16OMT medium borderline
Aaltescaffold_60433680 Alkaloid 16OMT medium borderline
Aaltescaffold_60433730 Alkaloid 16OMT medium borderline
Aaltescaffold_60433820 Alkaloid 16OMT medium borderline
Aaltescaffold_60433830 Alkaloid 16OMT medium borderline
Aaltescaffold_60433860 Alkaloid 16OMT medium borderline
Aaltescaffold_60434020 Alkaloid 16OMT medium borderline
Aaltescaffold_60434030 Alkaloid 16OMT medium borderline
Aaltescaffold_70442600 Alkaloid 16OMT low borderline
Aaltescaffold_70450840 Alkaloid 16OMT medium borderline
Aaltescaffold_70452860 Alkaloid 16OMT medium borderline
Aaltescaffold_70455240 Alkaloid 16OMT medium borderline
Aaltescaffold_70457270 Alkaloid 16OMT medium borderline
Aaltescaffold_70462090 Alkaloid 16OMT low borderline
Aaltescaffold_80470230 Alkaloid 16OMT medium borderline
Aaltescaffold_90525540 Alkaloid 16OMT medium borderline
Aaltescaffold_60432550 Alkaloid 6OMT_4OMT_SOMT low borderline
Aaltescaffold_70455510 Alkaloid 6OMT_4OMT_SOMT medium borderline
Aaltescaffold_80467440 Alkaloid 6OMT_4OMT_SOMT low borderline
Aaltescaffold_100086810 Alkaloid 7DLGT low borderline
Aaltescaffold_100089900 Alkaloid 7DLGT low borderline
Aaltescaffold_100089910 Alkaloid 7DLGT medium pass
Aaltescaffold_100089930 Alkaloid 7DLGT low borderline
Aaltescaffold_100089950 Alkaloid 7DLGT medium pass
Aaltescaffold_100089990 Alkaloid 7DLGT medium pass
Aaltescaffold_100099350 Alkaloid 7DLGT low borderline
Aaltescaffold_100108970 Alkaloid 7DLGT high pass