PlantSME Plant secondary metabolism enzyme database

Archidium alternifolium (archidium_alternifolium)

Imported from atlas release summary for Archidium alternifolium.

891
Candidate Genes
102
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (94)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 259 11 POD (97) View species results
Terpenoid pathway 190 20 BAHD (58) View species results
Alkaloid pathway 161 19 PYKS (29) View species results
Flavonoid pathway 135 10 PAL (38) View species results
Rosmarinic acid pathway 95 7 PAL (38) View species results
Steroid pathway 51 12 CAS (20) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 897 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 126 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: IFR
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Gene Pathway Family Confidence Status
Aaltescaffold_100080030 Flavonoid IFR low borderline
Aaltescaffold_100082250 Flavonoid IFR low borderline
Aaltescaffold_100093300 Flavonoid IFR low borderline
Aaltescaffold_100111660 Flavonoid IFR low borderline
Aaltescaffold_130175210 Flavonoid IFR medium pass
Aaltescaffold_130175220 Flavonoid IFR low borderline
Aaltescaffold_20186320 Flavonoid IFR low borderline
Aaltescaffold_20186340 Flavonoid IFR low borderline
Aaltescaffold_20186840 Flavonoid IFR low borderline
Aaltescaffold_20188900 Flavonoid IFR low borderline
Aaltescaffold_20195100 Flavonoid IFR low borderline
Aaltescaffold_20204130 Flavonoid IFR low borderline
Aaltescaffold_20204310 Flavonoid IFR low borderline
Aaltescaffold_20213130 Flavonoid IFR low borderline
Aaltescaffold_20226000 Flavonoid IFR low borderline
Aaltescaffold_20229700 Flavonoid IFR low borderline
Aaltescaffold_20239150 Flavonoid IFR low borderline
Aaltescaffold_20241580 Flavonoid IFR low borderline
Aaltescaffold_30278290 Flavonoid IFR low borderline
Aaltescaffold_30302000 Flavonoid IFR medium pass
Aaltescaffold_40324440 Flavonoid IFR low borderline
Aaltescaffold_40329610 Flavonoid IFR low borderline
Aaltescaffold_40332630 Flavonoid IFR low borderline
Aaltescaffold_40333020 Flavonoid IFR low borderline
Aaltescaffold_40336280 Flavonoid IFR high pass
Aaltescaffold_50359040 Flavonoid IFR low borderline
Aaltescaffold_50397560 Flavonoid IFR low borderline
Aaltescaffold_60411660 Flavonoid IFR medium pass
Aaltescaffold_60415440 Flavonoid IFR low borderline
Aaltescaffold_60426740 Flavonoid IFR low borderline
Aaltescaffold_60426810 Flavonoid IFR low borderline
Aaltescaffold_60434450 Flavonoid IFR low borderline
Aaltescaffold_70441620 Flavonoid IFR low borderline
Aaltescaffold_80479450 Flavonoid IFR low borderline
Aaltescaffold_90520610 Flavonoid IFR medium borderline
Aaltescaffold_90528770 Flavonoid IFR low borderline
Aaltescaffold_90531240 Flavonoid IFR low borderline