PlantSME Plant secondary metabolism enzyme database

Archidium alternifolium (archidium_alternifolium)

Imported from atlas release summary for Archidium alternifolium.

891
Candidate Genes
102
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (94)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 259 11 POD (97) View species results
Terpenoid pathway 190 20 BAHD (58) View species results
Alkaloid pathway 161 19 PYKS (29) View species results
Flavonoid pathway 135 10 PAL (38) View species results
Rosmarinic acid pathway 95 7 PAL (38) View species results
Steroid pathway 51 12 CAS (20) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 897 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 126 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Terpenoid pathway
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Gene Pathway Family Confidence Status
Aaltescaffold_100091490 Terpenoid AACT low borderline
Aaltescaffold_10009540 Terpenoid AACT medium borderline
Aaltescaffold_100103440 Terpenoid AACT medium borderline
Aaltescaffold_100118570 Terpenoid AACT medium borderline
Aaltescaffold_10013660 Terpenoid AACT medium pass
Aaltescaffold_90533180 Terpenoid AACT medium borderline
Aaltescaffold_100082970 Terpenoid BAHD low borderline
Aaltescaffold_100083330 Terpenoid BAHD low borderline
Aaltescaffold_100084650 Terpenoid BAHD low borderline
Aaltescaffold_100084710 Terpenoid BAHD low borderline
Aaltescaffold_100089010 Terpenoid BAHD medium pass
Aaltescaffold_100089470 Terpenoid BAHD medium pass
Aaltescaffold_100092400 Terpenoid BAHD medium pass
Aaltescaffold_100096430 Terpenoid BAHD medium pass
Aaltescaffold_100097470 Terpenoid BAHD medium pass
Aaltescaffold_100101510 Terpenoid BAHD medium pass
Aaltescaffold_100101540 Terpenoid BAHD low borderline
Aaltescaffold_100103700 Terpenoid BAHD medium pass
Aaltescaffold_100105820 Terpenoid BAHD low borderline
Aaltescaffold_100119540 Terpenoid BAHD medium pass
Aaltescaffold_100119730 Terpenoid BAHD medium pass
Aaltescaffold_100121870 Terpenoid BAHD medium pass
Aaltescaffold_100122970 Terpenoid BAHD low borderline
Aaltescaffold_10028510 Terpenoid BAHD medium pass
Aaltescaffold_10032420 Terpenoid BAHD low borderline
Aaltescaffold_10032900 Terpenoid BAHD low borderline
Aaltescaffold_10034200 Terpenoid BAHD low borderline
Aaltescaffold_10035500 Terpenoid BAHD low borderline
Aaltescaffold_10036370 Terpenoid BAHD medium pass
Aaltescaffold_10036420 Terpenoid BAHD low borderline
Aaltescaffold_10043600 Terpenoid BAHD medium pass
Aaltescaffold_10045830 Terpenoid BAHD medium pass
Aaltescaffold_10071250 Terpenoid BAHD low borderline
Aaltescaffold_110136990 Terpenoid BAHD medium pass
Aaltescaffold_20188750 Terpenoid BAHD medium pass
Aaltescaffold_20188800 Terpenoid BAHD medium pass
Aaltescaffold_20189840 Terpenoid BAHD medium pass
Aaltescaffold_20199330 Terpenoid BAHD medium pass
Aaltescaffold_20204940 Terpenoid BAHD medium pass
Aaltescaffold_20216920 Terpenoid BAHD medium pass
Aaltescaffold_20217210 Terpenoid BAHD medium pass
Aaltescaffold_20229050 Terpenoid BAHD low borderline
Aaltescaffold_20236590 Terpenoid BAHD low borderline
Aaltescaffold_20237310 Terpenoid BAHD medium pass
Aaltescaffold_30255060 Terpenoid BAHD medium pass
Aaltescaffold_30264600 Terpenoid BAHD medium pass
Aaltescaffold_30271700 Terpenoid BAHD medium pass
Aaltescaffold_30280720 Terpenoid BAHD medium pass
Aaltescaffold_30284730 Terpenoid BAHD medium pass
Aaltescaffold_30317290 Terpenoid BAHD low borderline