Archidium alternifolium (archidium_alternifolium)

This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.

Pathway Coverage

6 Pathways

Phenylpropanoid pathway 29.07% Terpenoid pathway 21.32% Alkaloid pathway 18.07% Flavonoid pathway 15.15% Rosmarinic acid pathway 10.66% Steroid pathway 5.72%

Family Distribution

891 Candidate Genes

C4H 6.34% C3'H/CYP98A 5.95% PAL 5.47% CYP76 5.21% POD 4.73% BAHD 4.26% 4CL 4.04% NMT 3.17%

Other Families 60.83%

More Families (94)

IFS 73 3.17% BR6OX2/CYP85A2 59 2.56% STR 56 2.43% F3'H/CYP75B 51 2.21% IO 48 2.08% UFGT 48 2.08% DWF4/CYP90B1 48 2.08% UGT 46 2.0% 7DLGT 43 1.87% T3O 42 1.82% COMT 42 1.82% F3H 41 1.78% PYKS 39 1.69% 16OMT 39 1.69% IFR 37 1.61% GS 32 1.39% CHS 30 1.3% CODM/T6ODM 26 1.13% LAC 26 1.13% T16H 25 1.09% CAS 24 1.04% CYP71 24 1.04% F3'5'H/CYP75A 23 1.0% G8O/G8H 22 0.96% CAD 21 0.91% SMT1/SMT2/SMT3 21 0.91% TRI/TRII 18 0.78% H6H 17 0.74% HCT 15 0.65% CSE 14 0.61% COR 13 0.56% SLS 13 0.56% RAS 13 0.56% TPS 13 0.56% 7DLH 12 0.52% FNS 12 0.52% GES 11 0.48% ANR 10 0.43% 8HGO 9 0.39% CNMT 9 0.39% CHI 9 0.39% F5H/CYP84A 9 0.39% SQE 9 0.39% SGD 8 0.35% BBE 8 0.35% CYP80B1 8 0.35% DFR 8 0.35% CCR 8 0.35% CPD/CYP90A1 8 0.35% CYP90D1 8 0.35% TDC 7 0.3% LAMT 7 0.3% PMT 7 0.3% TAT 7 0.3% MPO 6 0.26% CPR 6 0.26% SQS/FDFT1 6 0.26% BR6OX1/CYP85A1 6 0.26% CYP51G1 6 0.26% AACT 6 0.26% FPPS 6 0.26% MVK 6 0.26% DET2 5 0.22% ROT3/CYP90C1 5 0.22% GGPPS 5 0.22% ISY 4 0.17% CYP719 4 0.17% DWF5 4 0.17% MCT/IspD 4 0.17% 6OMT_4OMT_SOMT 3 0.13% CCoAOMT 3 0.13% PMK 3 0.13% HMGR 3 0.13% IDI 3 0.13% MVD 3 0.13% HMGS 3 0.13% TYDC_DDC 2 0.09% ADC 2 0.09% DWF7 2 0.09% SMO1/SMO2 2 0.09% CPI1 2 0.09% MDS/IspF 2 0.09% HDS/IspG 2 0.09% NCS 1 0.04% FLS 1 0.04% ANS/LDOX 1 0.04% HPPR 1 0.04% DWF1 1 0.04% FK 1 0.04% HYD1 1 0.04% DXS 1 0.04% HDR/IspH 1 0.04% DXR 1 0.04% CMK/IspE 1 0.04%

Species Pathway Results

The links below show identification results for this species within each pathway, instead of opening the global pathway overview.

Pathway	Candidate Genes	Families	Top family	Results
Phenylpropanoid pathway	259	11	POD (97)	View species results
Terpenoid pathway	190	20	BAHD (58)	View species results
Alkaloid pathway	161	19	PYKS (29)	View species results
Flavonoid pathway	135	10	PAL (38)	View species results
Rosmarinic acid pathway	95	7	PAL (38)	View species results
Steroid pathway	51	12	CAS (20)	View species results

Broad Catalytic Groups

P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.

Catalytic group	Families	Candidate genes	Included families
P450/oxygenase	23	897	7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase	3	126	BAHD, HCT, RAS

Identification Result List

Search the public identification results for this species; click pathway or family legends above to narrow within this species.

Current family filter: BAHD

Gene	Pathway	Family	Confidence	Status	Best Target
Aaltescaffold_100082970	Terpenoid	BAHD	low	borderline	BAHD__00025__sp_O64810_SCP10_ARATH
Aaltescaffold_100083330	Terpenoid	BAHD	low	borderline	BAHD__00025__sp_O64810_SCP10_ARATH
Aaltescaffold_100084650	Terpenoid	BAHD	low	borderline	BAHD__00016__sp_D4NUX0_HCT1_ACTRA
Aaltescaffold_100084710	Terpenoid	BAHD	low	borderline	BAHD__00042__sp_Q500Z2_ZDH20_ARATH
Aaltescaffold_100089010	Terpenoid	BAHD	medium	pass	BAHD__00014__sp_B9RK42_GPC1_RICCO
Aaltescaffold_100089470	Terpenoid	BAHD	medium	pass	BAHD__00059__sp_Q8S8S2_LPCT2_ARATH
Aaltescaffold_100092400	Terpenoid	BAHD	medium	pass	BAHD__00093__sp_Q9SV07_ASAT1_ARATH
Aaltescaffold_100096430	Terpenoid	BAHD	medium	pass	BAHD__00080__sp_Q9LIH7_ZDHC7_ARATH
Aaltescaffold_100097470	Terpenoid	BAHD	medium	pass	BAHD__00058__sp_Q8LG50_LPAT2_ARATH
Aaltescaffold_100101510	Terpenoid	BAHD	medium	pass	BAHD__00082__sp_Q9LLY4_LPAT1_BRANA
Aaltescaffold_100101540	Terpenoid	BAHD	low	borderline	BAHD__00082__sp_Q9LLY4_LPAT1_BRANA
Aaltescaffold_100103700	Terpenoid	BAHD	medium	pass	BAHD__00043__sp_Q52T38_ZDH22_ARATH
Aaltescaffold_100105820	Terpenoid	BAHD	low	borderline	BAHD__00026__sp_O64811_SCP9_ARATH
Aaltescaffold_100119540	Terpenoid	BAHD	medium	pass	BAHD__00068__sp_Q9C533_ZDHC1_ARATH
Aaltescaffold_100119730	Terpenoid	BAHD	medium	pass	BAHD__00056__sp_Q8L5Y5_ZDH17_ARATH
Aaltescaffold_100121870	Terpenoid	BAHD	medium	pass	BAHD__00063__sp_Q93VV0_ZDHC6_ARATH
Aaltescaffold_100122970	Terpenoid	BAHD	low	borderline	BAHD__00093__sp_Q9SV07_ASAT1_ARATH
Aaltescaffold_10028510	Terpenoid	BAHD	medium	pass	BAHD__00073__sp_Q9FF86_DCR_ARATH
Aaltescaffold_10032420	Terpenoid	BAHD	low	borderline	BAHD__00093__sp_Q9SV07_ASAT1_ARATH
Aaltescaffold_10032900	Terpenoid	BAHD	low	borderline	BAHD__00025__sp_O64810_SCP10_ARATH
Aaltescaffold_10034200	Terpenoid	BAHD	low	borderline	BAHD__00025__sp_O64810_SCP10_ARATH
Aaltescaffold_10035500	Terpenoid	BAHD	low	borderline	BAHD__00089__sp_Q9SB58_ZDH19_ARATH
Aaltescaffold_10036370	Terpenoid	BAHD	medium	pass	BAHD__00074__sp_Q9FFQ7_FACT_ARATH
Aaltescaffold_10036420	Terpenoid	BAHD	low	borderline	BAHD__00055__sp_Q8H780_SCP13_ARATH
Aaltescaffold_10043600	Terpenoid	BAHD	medium	pass	BAHD__00023__sp_O22975_LPAAT_ARATH
Aaltescaffold_10045830	Terpenoid	BAHD	medium	pass	BAHD__00059__sp_Q8S8S2_LPCT2_ARATH
Aaltescaffold_10071250	Terpenoid	BAHD	low	borderline	BAHD__00059__sp_Q8S8S2_LPCT2_ARATH
Aaltescaffold_110136990	Terpenoid	BAHD	medium	pass	BAHD__00051__sp_Q7XA86_ZDH11_ARATH
Aaltescaffold_20188750	Terpenoid	BAHD	medium	pass	BAHD__00035__sp_Q0WQK2_ZDHC9_ARATH
Aaltescaffold_20188800	Terpenoid	BAHD	medium	pass	BAHD__00035__sp_Q0WQK2_ZDHC9_ARATH
Aaltescaffold_20189840	Terpenoid	BAHD	medium	pass	BAHD__00059__sp_Q8S8S2_LPCT2_ARATH
Aaltescaffold_20199330	Terpenoid	BAHD	medium	pass	BAHD__00021__sp_K7K424_DAT2D_SOYBN
Aaltescaffold_20204940	Terpenoid	BAHD	medium	pass	BAHD__00062__sp_Q93V61_LCAT3_ARATH
Aaltescaffold_20216920	Terpenoid	BAHD	medium	pass	BAHD__00068__sp_Q9C533_ZDHC1_ARATH
Aaltescaffold_20217210	Terpenoid	BAHD	medium	pass	BAHD__00025__sp_O64810_SCP10_ARATH
Aaltescaffold_20229050	Terpenoid	BAHD	low	borderline	BAHD__00073__sp_Q9FF86_DCR_ARATH
Aaltescaffold_20236590	Terpenoid	BAHD	low	borderline	BAHD__00018__sp_I1MRZ6_DAT32_SOYBN
Aaltescaffold_20237310	Terpenoid	BAHD	medium	pass	BAHD__00055__sp_Q8H780_SCP13_ARATH
Aaltescaffold_30255060	Terpenoid	BAHD	medium	pass	BAHD__00034__sp_P10349_GPAT2_CUCMO
Aaltescaffold_30264600	Terpenoid	BAHD	medium	pass	BAHD__00088__sp_Q9M7Z1_ODB2_ARATH
Aaltescaffold_30271700	Terpenoid	BAHD	medium	pass	BAHD__00087__sp_Q9M3B1_WSD6_ARATH
Aaltescaffold_30280720	Terpenoid	BAHD	medium	pass	BAHD__00052__sp_Q8GWG0_GPAT9_ARATH
Aaltescaffold_30284730	Terpenoid	BAHD	medium	pass	BAHD__00057__sp_Q8L7R3_LPCT1_ARATH
Aaltescaffold_30317290	Terpenoid	BAHD	low	borderline	BAHD__00088__sp_Q9M7Z1_ODB2_ARATH
Aaltescaffold_30317790	Terpenoid	BAHD	medium	pass	BAHD__00027__sp_O80437_GPAT6_ARATH
Aaltescaffold_40323010	Terpenoid	BAHD	medium	pass	BAHD__00022__sp_K7PEY4_RAM2_MEDTR
Aaltescaffold_40324670	Terpenoid	BAHD	low	borderline	BAHD__00026__sp_O64811_SCP9_ARATH
Aaltescaffold_40327160	Terpenoid	BAHD	low	borderline	BAHD__00016__sp_D4NUX0_HCT1_ACTRA
Aaltescaffold_40329700	Terpenoid	BAHD	medium	pass	BAHD__00077__sp_Q9FNA9_PDAT1_ARATH
Aaltescaffold_40331160	Terpenoid	BAHD	low	borderline	BAHD__00055__sp_Q8H780_SCP13_ARATH