Archidium alternifolium (archidium_alternifolium)
Imported from atlas release summary for Archidium alternifolium.
891
Candidate Genes
102
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
891
Candidate Genes
C4H
6.34%
C3'H/CYP98A
5.95%
PAL
5.47%
CYP76
5.21%
POD
4.73%
BAHD
4.26%
4CL
4.04%
NMT
3.17%
Other Families
60.83%
More Families (94)
IFS
73
3.17%
BR6OX2/CYP85A2
59
2.56%
STR
56
2.43%
F3'H/CYP75B
51
2.21%
IO
48
2.08%
UFGT
48
2.08%
DWF4/CYP90B1
48
2.08%
UGT
46
2.0%
7DLGT
43
1.87%
T3O
42
1.82%
COMT
42
1.82%
F3H
41
1.78%
PYKS
39
1.69%
16OMT
39
1.69%
IFR
37
1.61%
GS
32
1.39%
CHS
30
1.3%
CODM/T6ODM
26
1.13%
LAC
26
1.13%
T16H
25
1.09%
CAS
24
1.04%
CYP71
24
1.04%
F3'5'H/CYP75A
23
1.0%
G8O/G8H
22
0.96%
CAD
21
0.91%
SMT1/SMT2/SMT3
21
0.91%
TRI/TRII
18
0.78%
H6H
17
0.74%
HCT
15
0.65%
CSE
14
0.61%
COR
13
0.56%
SLS
13
0.56%
RAS
13
0.56%
TPS
13
0.56%
7DLH
12
0.52%
FNS
12
0.52%
GES
11
0.48%
ANR
10
0.43%
8HGO
9
0.39%
CNMT
9
0.39%
CHI
9
0.39%
F5H/CYP84A
9
0.39%
SQE
9
0.39%
SGD
8
0.35%
BBE
8
0.35%
CYP80B1
8
0.35%
DFR
8
0.35%
CCR
8
0.35%
CPD/CYP90A1
8
0.35%
CYP90D1
8
0.35%
TDC
7
0.3%
LAMT
7
0.3%
PMT
7
0.3%
TAT
7
0.3%
MPO
6
0.26%
CPR
6
0.26%
SQS/FDFT1
6
0.26%
BR6OX1/CYP85A1
6
0.26%
CYP51G1
6
0.26%
AACT
6
0.26%
FPPS
6
0.26%
MVK
6
0.26%
DET2
5
0.22%
ROT3/CYP90C1
5
0.22%
GGPPS
5
0.22%
ISY
4
0.17%
CYP719
4
0.17%
DWF5
4
0.17%
MCT/IspD
4
0.17%
6OMT_4OMT_SOMT
3
0.13%
CCoAOMT
3
0.13%
PMK
3
0.13%
HMGR
3
0.13%
IDI
3
0.13%
MVD
3
0.13%
HMGS
3
0.13%
TYDC_DDC
2
0.09%
ADC
2
0.09%
DWF7
2
0.09%
SMO1/SMO2
2
0.09%
CPI1
2
0.09%
MDS/IspF
2
0.09%
HDS/IspG
2
0.09%
NCS
1
0.04%
FLS
1
0.04%
ANS/LDOX
1
0.04%
HPPR
1
0.04%
DWF1
1
0.04%
FK
1
0.04%
HYD1
1
0.04%
DXS
1
0.04%
HDR/IspH
1
0.04%
DXR
1
0.04%
CMK/IspE
1
0.04%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Phenylpropanoid pathway | 259 | 11 | POD (97) | View species results |
| Terpenoid pathway | 190 | 20 | BAHD (58) | View species results |
| Alkaloid pathway | 161 | 19 | PYKS (29) | View species results |
| Flavonoid pathway | 135 | 10 | PAL (38) | View species results |
| Rosmarinic acid pathway | 95 | 7 | PAL (38) | View species results |
| Steroid pathway | 51 | 12 | CAS (20) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 23 | 897 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 126 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: UGT
| Gene | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| Aaltescaffold_100089900 | Terpenoid | UGT | medium | pass | UGT__00105__sp_Q9SK82_U85A1_ARATH |
| Aaltescaffold_100089910 | Terpenoid | UGT | medium | pass | UGT__00034__sp_F8WLS6_UGT6_CATRO |
| Aaltescaffold_100089920 | Terpenoid | UGT | medium | pass | UGT__00093__sp_Q9LR44_U75B1_ARATH |
| Aaltescaffold_100089930 | Terpenoid | UGT | medium | pass | UGT__00034__sp_F8WLS6_UGT6_CATRO |
| Aaltescaffold_100089950 | Terpenoid | UGT | medium | pass | UGT__00034__sp_F8WLS6_UGT6_CATRO |
| Aaltescaffold_100089990 | Terpenoid | UGT | medium | pass | UGT__00034__sp_F8WLS6_UGT6_CATRO |
| Aaltescaffold_100099350 | Terpenoid | UGT | medium | pass | UGT__00103__sp_Q9M156_U72B1_ARATH |
| Aaltescaffold_100108970 | Terpenoid | UGT | medium | pass | UGT__00034__sp_F8WLS6_UGT6_CATRO |
| Aaltescaffold_100115380 | Terpenoid | UGT | low | borderline | UGT__00103__sp_Q9M156_U72B1_ARATH |
| Aaltescaffold_100115540 | Terpenoid | UGT | medium | pass | UGT__00088__sp_Q9LK73_U88A1_ARATH |
| Aaltescaffold_100115550 | Terpenoid | UGT | medium | pass | UGT__00093__sp_Q9LR44_U75B1_ARATH |
| Aaltescaffold_10032110 | Terpenoid | UGT | low | borderline | UGT__00105__sp_Q9SK82_U85A1_ARATH |
| Aaltescaffold_20201370 | Terpenoid | UGT | medium | pass | UGT__00103__sp_Q9M156_U72B1_ARATH |
| Aaltescaffold_20201390 | Terpenoid | UGT | medium | pass | UGT__00103__sp_Q9M156_U72B1_ARATH |
| Aaltescaffold_20204720 | Terpenoid | UGT | medium | pass | UGT__00103__sp_Q9M156_U72B1_ARATH |
| Aaltescaffold_20208460 | Terpenoid | UGT | medium | pass | UGT__00105__sp_Q9SK82_U85A1_ARATH |
| Aaltescaffold_20218730 | Terpenoid | UGT | medium | pass | UGT__00103__sp_Q9M156_U72B1_ARATH |
| Aaltescaffold_20218760 | Terpenoid | UGT | medium | pass | UGT__00103__sp_Q9M156_U72B1_ARATH |
| Aaltescaffold_20218950 | Terpenoid | UGT | medium | pass | UGT__00103__sp_Q9M156_U72B1_ARATH |
| Aaltescaffold_20223980 | Terpenoid | UGT | medium | pass | UGT__00079__sp_Q94A84_U72E1_ARATH |
| Aaltescaffold_30272580 | Terpenoid | UGT | low | borderline | UGT__00103__sp_Q9M156_U72B1_ARATH |
| Aaltescaffold_30310280 | Terpenoid | UGT | medium | pass | UGT__00027__sp_D3UAG0_U71K1_MALDO |
| Aaltescaffold_40329830 | Terpenoid | UGT | medium | pass | UGT__00076__sp_Q8L7M0_TUN_ARATH |
| Aaltescaffold_40346640 | Terpenoid | UGT | low | borderline | UGT__00103__sp_Q9M156_U72B1_ARATH |
| Aaltescaffold_50388700 | Terpenoid | UGT | low | borderline | UGT__00112__sp_Q9ZQG4_U73B5_ARATH |
| Aaltescaffold_50388750 | Terpenoid | UGT | medium | pass | UGT__00103__sp_Q9M156_U72B1_ARATH |
| Aaltescaffold_50388780 | Terpenoid | UGT | medium | pass | UGT__00103__sp_Q9M156_U72B1_ARATH |
| Aaltescaffold_50388790 | Terpenoid | UGT | medium | pass | UGT__00103__sp_Q9M156_U72B1_ARATH |
| Aaltescaffold_50388800 | Terpenoid | UGT | medium | pass | UGT__00103__sp_Q9M156_U72B1_ARATH |
| Aaltescaffold_60419190 | Terpenoid | UGT | medium | pass | UGT__00079__sp_Q94A84_U72E1_ARATH |
| Aaltescaffold_60419210 | Terpenoid | UGT | medium | pass | UGT__00061__sp_P0DO49_U71K3_FRAAN |
| Aaltescaffold_60419680 | Terpenoid | UGT | medium | pass | UGT__00088__sp_Q9LK73_U88A1_ARATH |
| Aaltescaffold_60419690 | Terpenoid | UGT | medium | pass | UGT__00115__sp_U3U992_UGT8_CATRO |
| Aaltescaffold_60419710 | Terpenoid | UGT | low | borderline | UGT__00061__sp_P0DO49_U71K3_FRAAN |
| Aaltescaffold_60424860 | Terpenoid | UGT | medium | pass | UGT__00032__sp_F8WKW1_UGT2_GARJA |
| Aaltescaffold_60433500 | Terpenoid | UGT | medium | pass | UGT__00103__sp_Q9M156_U72B1_ARATH |
| Aaltescaffold_70442960 | Terpenoid | UGT | low | borderline | UGT__00103__sp_Q9M156_U72B1_ARATH |
| Aaltescaffold_70454170 | Terpenoid | UGT | medium | pass | UGT__00103__sp_Q9M156_U72B1_ARATH |
| Aaltescaffold_80475410 | Terpenoid | UGT | medium | pass | UGT__00105__sp_Q9SK82_U85A1_ARATH |
| Aaltescaffold_80475440 | Terpenoid | UGT | low | borderline | UGT__00022__sp_B2XBQ5_85A19_PRUDU |
| Aaltescaffold_80479500 | Terpenoid | UGT | medium | pass | UGT__00103__sp_Q9M156_U72B1_ARATH |
| Aaltescaffold_80489210 | Terpenoid | UGT | medium | pass | UGT__00103__sp_Q9M156_U72B1_ARATH |
| Aaltescaffold_80489260 | Terpenoid | UGT | medium | pass | UGT__00103__sp_Q9M156_U72B1_ARATH |
| Aaltescaffold_80492300 | Terpenoid | UGT | medium | pass | UGT__00103__sp_Q9M156_U72B1_ARATH |
| Aaltescaffold_80492430 | Terpenoid | UGT | medium | pass | UGT__00105__sp_Q9SK82_U85A1_ARATH |
| Aaltescaffold_80495000 | Terpenoid | UGT | medium | pass | UGT__00034__sp_F8WLS6_UGT6_CATRO |