PlantSME Plant secondary metabolism enzyme database

Archidium alternifolium (archidium_alternifolium)

Imported from atlas release summary for Archidium alternifolium.

891
Candidate Genes
102
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (94)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 259 11 POD (97) View species results
Terpenoid pathway 190 20 BAHD (58) View species results
Alkaloid pathway 161 19 PYKS (29) View species results
Flavonoid pathway 135 10 PAL (38) View species results
Rosmarinic acid pathway 95 7 PAL (38) View species results
Steroid pathway 51 12 CAS (20) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 897 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 126 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: T16H
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Gene Pathway Family Confidence Status Best Target
Aaltescaffold_100100240 Alkaloid T16H medium borderline T16H__00002__sp_U5HKE8_C71DZ_CATRO
Aaltescaffold_10033710 Alkaloid T16H medium borderline T16H__00002__sp_U5HKE8_C71DZ_CATRO
Aaltescaffold_20192640 Alkaloid T16H low borderline T16H__00001__sp_P98183_C71DC_CATRO
Aaltescaffold_20223480 Alkaloid T16H medium borderline T16H__00001__sp_P98183_C71DC_CATRO
Aaltescaffold_20235750 Alkaloid T16H medium borderline T16H__00001__sp_P98183_C71DC_CATRO
Aaltescaffold_30276440 Alkaloid T16H medium borderline T16H__00001__sp_P98183_C71DC_CATRO
Aaltescaffold_30277650 Alkaloid T16H medium borderline T16H__00001__sp_P98183_C71DC_CATRO
Aaltescaffold_40332600 Alkaloid T16H medium borderline T16H__00001__sp_P98183_C71DC_CATRO
Aaltescaffold_40336670 Alkaloid T16H medium borderline T16H__00001__sp_P98183_C71DC_CATRO
Aaltescaffold_40344940 Alkaloid T16H medium borderline T16H__00001__sp_P98183_C71DC_CATRO
Aaltescaffold_40351840 Alkaloid T16H medium borderline T16H__00001__sp_P98183_C71DC_CATRO
Aaltescaffold_50376940 Alkaloid T16H medium borderline T16H__00001__sp_P98183_C71DC_CATRO
Aaltescaffold_50380150 Alkaloid T16H medium borderline T16H__00001__sp_P98183_C71DC_CATRO
Aaltescaffold_50380450 Alkaloid T16H medium borderline T16H__00001__sp_P98183_C71DC_CATRO
Aaltescaffold_50381130 Alkaloid T16H medium borderline T16H__00001__sp_P98183_C71DC_CATRO
Aaltescaffold_60413380 Alkaloid T16H medium borderline T16H__00001__sp_P98183_C71DC_CATRO
Aaltescaffold_60413480 Alkaloid T16H medium borderline T16H__00002__sp_U5HKE8_C71DZ_CATRO
Aaltescaffold_60425650 Alkaloid T16H medium borderline T16H__00002__sp_U5HKE8_C71DZ_CATRO
Aaltescaffold_60426680 Alkaloid T16H medium borderline T16H__00001__sp_P98183_C71DC_CATRO
Aaltescaffold_60434230 Alkaloid T16H medium borderline T16H__00001__sp_P98183_C71DC_CATRO
Aaltescaffold_60437110 Alkaloid T16H medium borderline T16H__00001__sp_P98183_C71DC_CATRO
Aaltescaffold_70449840 Alkaloid T16H medium borderline T16H__00001__sp_P98183_C71DC_CATRO
Aaltescaffold_80476910 Alkaloid T16H medium borderline T16H__00002__sp_U5HKE8_C71DZ_CATRO
Aaltescaffold_80500950 Alkaloid T16H medium borderline T16H__00001__sp_P98183_C71DC_CATRO
Aaltescaffold_90508030 Alkaloid T16H medium borderline T16H__00001__sp_P98183_C71DC_CATRO