PlantSME Plant secondary metabolism enzyme database

Archidium alternifolium (archidium_alternifolium)

Imported from atlas release summary for Archidium alternifolium.

891
Candidate Genes
102
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (94)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 259 11 POD (97) View species results
Terpenoid pathway 190 20 BAHD (58) View species results
Alkaloid pathway 161 19 PYKS (29) View species results
Flavonoid pathway 135 10 PAL (38) View species results
Rosmarinic acid pathway 95 7 PAL (38) View species results
Steroid pathway 51 12 CAS (20) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 897 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 126 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: F3H
Reset
Gene Pathway Family Confidence Status
Aaltescaffold_100084850 Flavonoid F3H low borderline
Aaltescaffold_100084870 Flavonoid F3H medium pass
Aaltescaffold_100084920 Flavonoid F3H medium borderline
Aaltescaffold_100089180 Flavonoid F3H medium borderline
Aaltescaffold_100105040 Flavonoid F3H medium borderline
Aaltescaffold_100120150 Flavonoid F3H medium borderline
Aaltescaffold_100124830 Flavonoid F3H medium borderline
Aaltescaffold_10012870 Flavonoid F3H medium borderline
Aaltescaffold_10021030 Flavonoid F3H medium borderline
Aaltescaffold_10021810 Flavonoid F3H medium borderline
Aaltescaffold_10036740 Flavonoid F3H medium borderline
Aaltescaffold_20193090 Flavonoid F3H medium pass
Aaltescaffold_20220350 Flavonoid F3H low borderline
Aaltescaffold_20231060 Flavonoid F3H low borderline
Aaltescaffold_30310550 Flavonoid F3H medium borderline
Aaltescaffold_40339070 Flavonoid F3H medium borderline
Aaltescaffold_40339140 Flavonoid F3H medium borderline
Aaltescaffold_40342250 Flavonoid F3H medium borderline
Aaltescaffold_40344980 Flavonoid F3H medium borderline
Aaltescaffold_470354570 Flavonoid F3H low borderline
Aaltescaffold_50368100 Flavonoid F3H medium borderline
Aaltescaffold_50409020 Flavonoid F3H medium borderline
Aaltescaffold_60415760 Flavonoid F3H medium borderline
Aaltescaffold_60415790 Flavonoid F3H medium pass
Aaltescaffold_60416090 Flavonoid F3H medium borderline
Aaltescaffold_60425430 Flavonoid F3H medium borderline
Aaltescaffold_60425480 Flavonoid F3H low borderline
Aaltescaffold_60427830 Flavonoid F3H medium borderline
Aaltescaffold_70443010 Flavonoid F3H medium borderline
Aaltescaffold_70447790 Flavonoid F3H medium borderline
Aaltescaffold_70453050 Flavonoid F3H medium borderline
Aaltescaffold_70463910 Flavonoid F3H medium borderline
Aaltescaffold_80471290 Flavonoid F3H medium borderline
Aaltescaffold_80475700 Flavonoid F3H medium pass
Aaltescaffold_80481000 Flavonoid F3H medium borderline
Aaltescaffold_80489900 Flavonoid F3H medium borderline
Aaltescaffold_80493600 Flavonoid F3H low borderline
Aaltescaffold_80496190 Flavonoid F3H medium borderline
Aaltescaffold_80496280 Flavonoid F3H medium borderline
Aaltescaffold_80498750 Flavonoid F3H low borderline
Aaltescaffold_90514550 Flavonoid F3H medium borderline