PlantSME Plant secondary metabolism enzyme database

Archidium alternifolium (archidium_alternifolium)

Imported from atlas release summary for Archidium alternifolium.

891
Candidate Genes
102
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (94)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 259 11 POD (97) View species results
Terpenoid pathway 190 20 BAHD (58) View species results
Alkaloid pathway 161 19 PYKS (29) View species results
Flavonoid pathway 135 10 PAL (38) View species results
Rosmarinic acid pathway 95 7 PAL (38) View species results
Steroid pathway 51 12 CAS (20) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 897 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 126 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Flavonoid pathway
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Gene Pathway Family Confidence Status
Aaltescaffold_100101080 Flavonoid 4CL medium pass
Aaltescaffold_100121800 Flavonoid 4CL medium pass
Aaltescaffold_100123140 Flavonoid 4CL medium pass
Aaltescaffold_10059620 Flavonoid 4CL low borderline
Aaltescaffold_10072140 Flavonoid 4CL low borderline
Aaltescaffold_10073780 Flavonoid 4CL medium pass
Aaltescaffold_10074910 Flavonoid 4CL medium pass
Aaltescaffold_20186420 Flavonoid 4CL medium pass
Aaltescaffold_20197280 Flavonoid 4CL medium pass
Aaltescaffold_20198700 Flavonoid 4CL low borderline
Aaltescaffold_20204570 Flavonoid 4CL medium pass
Aaltescaffold_20209510 Flavonoid 4CL low borderline
Aaltescaffold_20214160 Flavonoid 4CL low borderline
Aaltescaffold_20225210 Flavonoid 4CL medium pass
Aaltescaffold_20231710 Flavonoid 4CL low borderline
Aaltescaffold_30249050 Flavonoid 4CL low borderline
Aaltescaffold_30253850 Flavonoid 4CL medium pass
Aaltescaffold_30268970 Flavonoid 4CL medium pass
Aaltescaffold_40346940 Flavonoid 4CL medium pass
Aaltescaffold_50364030 Flavonoid 4CL low borderline
Aaltescaffold_50382790 Flavonoid 4CL low borderline
Aaltescaffold_50383350 Flavonoid 4CL low borderline
Aaltescaffold_50383360 Flavonoid 4CL low borderline
Aaltescaffold_60418210 Flavonoid 4CL low borderline
Aaltescaffold_60424440 Flavonoid 4CL medium pass
Aaltescaffold_70445610 Flavonoid 4CL medium pass
Aaltescaffold_70449350 Flavonoid 4CL medium pass
Aaltescaffold_70460080 Flavonoid 4CL low borderline
Aaltescaffold_70461580 Flavonoid 4CL low borderline
Aaltescaffold_80484650 Flavonoid 4CL low borderline
Aaltescaffold_90528040 Flavonoid 4CL medium pass
Aaltescaffold_20208740 Flavonoid ANR low borderline
Aaltescaffold_20211000 Flavonoid ANR medium borderline
Aaltescaffold_30248730 Flavonoid ANR low borderline
Aaltescaffold_30291440 Flavonoid ANR medium borderline
Aaltescaffold_40346180 Flavonoid ANR medium borderline
Aaltescaffold_40346200 Flavonoid ANR medium borderline
Aaltescaffold_40346230 Flavonoid ANR medium borderline
Aaltescaffold_50390700 Flavonoid ANR low borderline
Aaltescaffold_90505780 Flavonoid ANR medium borderline
Aaltescaffold_90506020 Flavonoid ANR medium borderline
Aaltescaffold_80496270 Flavonoid ANS/LDOX medium borderline
Aaltescaffold_10033710 Flavonoid C4H medium borderline
Aaltescaffold_10053730 Flavonoid C4H medium borderline
Aaltescaffold_60427060 Flavonoid C4H low borderline
Aaltescaffold_80500950 Flavonoid C4H medium borderline
Aaltescaffold_10005650 Flavonoid CHI low borderline
Aaltescaffold_100097210 Flavonoid CHI medium pass
Aaltescaffold_10057330 Flavonoid CHI low borderline
Aaltescaffold_110158580 Flavonoid CHI low borderline