PlantSME Plant secondary metabolism enzyme database

Archidium alternifolium (archidium_alternifolium)

Imported from atlas release summary for Archidium alternifolium.

891
Candidate Genes
102
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (94)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 259 11 POD (97) View species results
Terpenoid pathway 190 20 BAHD (58) View species results
Alkaloid pathway 161 19 PYKS (29) View species results
Flavonoid pathway 135 10 PAL (38) View species results
Rosmarinic acid pathway 95 7 PAL (38) View species results
Steroid pathway 51 12 CAS (20) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 897 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 126 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Rosmarinic acid pathway
Reset
Gene Pathway Family Confidence Status
Aaltescaffold_100101080 Rosmarinic Acid 4CL medium pass
Aaltescaffold_100121800 Rosmarinic Acid 4CL medium pass
Aaltescaffold_100123140 Rosmarinic Acid 4CL medium pass
Aaltescaffold_10059620 Rosmarinic Acid 4CL low borderline
Aaltescaffold_10072140 Rosmarinic Acid 4CL low borderline
Aaltescaffold_10073780 Rosmarinic Acid 4CL medium pass
Aaltescaffold_10074910 Rosmarinic Acid 4CL medium pass
Aaltescaffold_20186420 Rosmarinic Acid 4CL medium pass
Aaltescaffold_20197280 Rosmarinic Acid 4CL medium pass
Aaltescaffold_20198700 Rosmarinic Acid 4CL low borderline
Aaltescaffold_20204570 Rosmarinic Acid 4CL medium pass
Aaltescaffold_20209510 Rosmarinic Acid 4CL low borderline
Aaltescaffold_20214160 Rosmarinic Acid 4CL low borderline
Aaltescaffold_20225210 Rosmarinic Acid 4CL medium pass
Aaltescaffold_20231710 Rosmarinic Acid 4CL low borderline
Aaltescaffold_30249050 Rosmarinic Acid 4CL low borderline
Aaltescaffold_30253850 Rosmarinic Acid 4CL medium pass
Aaltescaffold_30268970 Rosmarinic Acid 4CL medium pass
Aaltescaffold_40346940 Rosmarinic Acid 4CL medium pass
Aaltescaffold_50364030 Rosmarinic Acid 4CL low borderline
Aaltescaffold_50382790 Rosmarinic Acid 4CL low borderline
Aaltescaffold_50383350 Rosmarinic Acid 4CL low borderline
Aaltescaffold_50383360 Rosmarinic Acid 4CL low borderline
Aaltescaffold_60418210 Rosmarinic Acid 4CL low borderline
Aaltescaffold_60424440 Rosmarinic Acid 4CL medium pass
Aaltescaffold_70445610 Rosmarinic Acid 4CL medium pass
Aaltescaffold_70449350 Rosmarinic Acid 4CL medium pass
Aaltescaffold_70460080 Rosmarinic Acid 4CL low borderline
Aaltescaffold_70461580 Rosmarinic Acid 4CL low borderline
Aaltescaffold_80484650 Rosmarinic Acid 4CL low borderline
Aaltescaffold_90528040 Rosmarinic Acid 4CL medium pass
Aaltescaffold_100084370 Rosmarinic Acid C4H medium pass
Aaltescaffold_100084610 Rosmarinic Acid C4H low borderline
Aaltescaffold_100085420 Rosmarinic Acid C4H low borderline
Aaltescaffold_100086470 Rosmarinic Acid C4H medium pass
Aaltescaffold_100086480 Rosmarinic Acid C4H medium pass
Aaltescaffold_100086490 Rosmarinic Acid C4H low borderline
Aaltescaffold_100086500 Rosmarinic Acid C4H low borderline
Aaltescaffold_100095640 Rosmarinic Acid C4H medium pass
Aaltescaffold_100100240 Rosmarinic Acid C4H medium pass
Aaltescaffold_100106570 Rosmarinic Acid C4H medium pass
Aaltescaffold_100107480 Rosmarinic Acid C4H low borderline
Aaltescaffold_100113980 Rosmarinic Acid C4H low borderline
Aaltescaffold_100115180 Rosmarinic Acid C4H medium pass
Aaltescaffold_100120280 Rosmarinic Acid C4H low borderline
Aaltescaffold_10017420 Rosmarinic Acid C4H low borderline
Aaltescaffold_10033710 Rosmarinic Acid C4H medium pass
Aaltescaffold_10042180 Rosmarinic Acid C4H low borderline
Aaltescaffold_10042190 Rosmarinic Acid C4H low borderline
Aaltescaffold_10053730 Rosmarinic Acid C4H medium pass