PlantSME Plant secondary metabolism enzyme database

Polytrichastrum alpinum (polytrichastrum_alpinum)

Imported from atlas release summary for Polytrichastrum alpinum.

607
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 164 11 POD (61) View species results
Terpenoid pathway 137 17 BAHD (50) View species results
Alkaloid pathway 115 16 NMT (17) View species results
Rosmarinic acid pathway 83 7 C4H (37) View species results
Flavonoid pathway 78 7 UFGT (24) View species results
Steroid pathway 30 12 CAS (8) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 735 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 103 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Gene Pathway Family Confidence Status
Palpscaffold_20038880 Alkaloid 16OMT medium borderline
Palpscaffold_20040970 Alkaloid 16OMT medium borderline
Palpscaffold_40080140 Alkaloid 16OMT medium borderline
Palpscaffold_40080150 Alkaloid 16OMT medium borderline
Palpscaffold_40087540 Alkaloid 16OMT medium borderline
Palpscaffold_60166230 Alkaloid 16OMT medium borderline
Palpscaffold_60168100 Alkaloid 16OMT medium borderline
Palpscaffold_60171980 Alkaloid 16OMT medium borderline
Palpscaffold_60175150 Alkaloid 16OMT medium borderline
Palpscaffold_60175160 Alkaloid 16OMT medium borderline
Palpscaffold_70211300 Alkaloid 16OMT medium borderline
Palpscaffold_20044930 Alkaloid 6OMT_4OMT_SOMT low borderline
Palpscaffold_20047980 Alkaloid 6OMT_4OMT_SOMT medium borderline
Palpscaffold_50119010 Alkaloid 6OMT_4OMT_SOMT low borderline
Palpscaffold_70193990 Alkaloid 6OMT_4OMT_SOMT low borderline
Palpscaffold_10000840 Alkaloid 7DLGT medium pass
Palpscaffold_10009920 Alkaloid 7DLGT medium pass
Palpscaffold_10027800 Alkaloid 7DLGT medium pass
Palpscaffold_20051830 Alkaloid 7DLGT low borderline
Palpscaffold_20052240 Alkaloid 7DLGT medium pass
Palpscaffold_30059840 Alkaloid 7DLGT medium pass
Palpscaffold_30063230 Alkaloid 7DLGT medium pass
Palpscaffold_30065700 Alkaloid 7DLGT medium pass
Palpscaffold_30075960 Alkaloid 7DLGT low borderline
Palpscaffold_30077440 Alkaloid 7DLGT low borderline
Palpscaffold_30077580 Alkaloid 7DLGT low borderline
Palpscaffold_40093930 Alkaloid 7DLGT medium pass
Palpscaffold_40096090 Alkaloid 7DLGT low borderline
Palpscaffold_50108920 Alkaloid 7DLGT low borderline
Palpscaffold_50117670 Alkaloid 7DLGT low borderline
Palpscaffold_50135740 Alkaloid 7DLGT medium pass
Palpscaffold_50135770 Alkaloid 7DLGT medium pass
Palpscaffold_60148860 Alkaloid 7DLGT medium pass
Palpscaffold_60155420 Alkaloid 7DLGT medium pass
Palpscaffold_60169170 Alkaloid 7DLGT low borderline
Palpscaffold_70181620 Alkaloid 7DLGT medium pass
Palpscaffold_70183620 Alkaloid 7DLGT low borderline
Palpscaffold_70189180 Alkaloid 7DLGT low borderline
Palpscaffold_70189190 Alkaloid 7DLGT low borderline
Palpscaffold_70199930 Alkaloid 7DLGT low borderline
Palpscaffold_70199940 Alkaloid 7DLGT medium pass
Palpscaffold_70206750 Alkaloid 7DLGT low borderline
Palpscaffold_70206770 Alkaloid 7DLGT low borderline
Palpscaffold_10013180 Alkaloid 7DLH low borderline
Palpscaffold_10022410 Alkaloid 7DLH medium borderline
Palpscaffold_10022420 Alkaloid 7DLH medium borderline
Palpscaffold_10022550 Alkaloid 7DLH medium borderline
Palpscaffold_10026260 Alkaloid 7DLH medium borderline
Palpscaffold_50139500 Alkaloid 7DLH medium borderline
Palpscaffold_60158340 Alkaloid 7DLH medium borderline