PlantSME Plant secondary metabolism enzyme database

Polytrichastrum alpinum (polytrichastrum_alpinum)

Imported from atlas release summary for Polytrichastrum alpinum.

607
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 164 11 POD (61) View species results
Terpenoid pathway 137 17 BAHD (50) View species results
Alkaloid pathway 115 16 NMT (17) View species results
Rosmarinic acid pathway 83 7 C4H (37) View species results
Flavonoid pathway 78 7 UFGT (24) View species results
Steroid pathway 30 12 CAS (8) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 735 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 103 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Gene Pathway Family Confidence Status
Palpscaffold_60158350 Alkaloid 7DLH medium borderline
Palpscaffold_60173860 Alkaloid 7DLH medium borderline
Palpscaffold_10019200 Alkaloid 8HGO medium borderline
Palpscaffold_40089560 Alkaloid 8HGO medium borderline
Palpscaffold_50118850 Alkaloid 8HGO medium borderline
Palpscaffold_50126360 Alkaloid 8HGO medium borderline
Palpscaffold_30055160 Alkaloid ADC medium pass
Palpscaffold_80223050 Alkaloid ADC medium pass
Palpscaffold_10000880 Alkaloid BBE low borderline
Palpscaffold_50113000 Alkaloid BBE low borderline
Palpscaffold_50116230 Alkaloid BBE low borderline
Palpscaffold_50128150 Alkaloid BBE low borderline
Palpscaffold_60169660 Alkaloid BBE low borderline
Palpscaffold_60170220 Alkaloid BBE low borderline
Palpscaffold_70192510 Alkaloid BBE low borderline
Palpscaffold_10005890 Alkaloid CNMT low borderline
Palpscaffold_10016770 Alkaloid CNMT low borderline
Palpscaffold_20043380 Alkaloid CNMT low borderline
Palpscaffold_50104850 Alkaloid CNMT low borderline
Palpscaffold_50126970 Alkaloid CNMT low borderline
Palpscaffold_60174050 Alkaloid CNMT medium borderline
Palpscaffold_70180600 Alkaloid CNMT low borderline
Palpscaffold_10015190 Alkaloid CODM/T6ODM medium borderline
Palpscaffold_10022030 Alkaloid CODM/T6ODM medium borderline
Palpscaffold_10022460 Alkaloid CODM/T6ODM medium borderline
Palpscaffold_10028110 Alkaloid CODM/T6ODM medium borderline
Palpscaffold_20040240 Alkaloid CODM/T6ODM medium borderline
Palpscaffold_20043510 Alkaloid CODM/T6ODM medium borderline
Palpscaffold_20046150 Alkaloid CODM/T6ODM medium borderline
Palpscaffold_20046190 Alkaloid CODM/T6ODM medium borderline
Palpscaffold_20046200 Alkaloid CODM/T6ODM medium borderline
Palpscaffold_30057060 Alkaloid CODM/T6ODM medium borderline
Palpscaffold_40086280 Alkaloid CODM/T6ODM medium borderline
Palpscaffold_40087980 Alkaloid CODM/T6ODM medium borderline
Palpscaffold_40102800 Alkaloid CODM/T6ODM medium borderline
Palpscaffold_50103930 Alkaloid CODM/T6ODM medium borderline
Palpscaffold_50106650 Alkaloid CODM/T6ODM medium borderline
Palpscaffold_50108460 Alkaloid CODM/T6ODM medium borderline
Palpscaffold_50125420 Alkaloid CODM/T6ODM medium borderline
Palpscaffold_50142930 Alkaloid CODM/T6ODM medium borderline
Palpscaffold_60155430 Alkaloid CODM/T6ODM medium borderline
Palpscaffold_60158970 Alkaloid CODM/T6ODM medium borderline
Palpscaffold_60161040 Alkaloid CODM/T6ODM medium borderline
Palpscaffold_60162550 Alkaloid CODM/T6ODM medium borderline
Palpscaffold_70180440 Alkaloid CODM/T6ODM medium borderline
Palpscaffold_70180460 Alkaloid CODM/T6ODM medium borderline
Palpscaffold_70180530 Alkaloid CODM/T6ODM medium borderline
Palpscaffold_70180540 Alkaloid CODM/T6ODM medium borderline
Palpscaffold_70184140 Alkaloid CODM/T6ODM medium borderline
Palpscaffold_70186440 Alkaloid CODM/T6ODM medium borderline