PlantSME Plant secondary metabolism enzyme database

Polytrichastrum alpinum (polytrichastrum_alpinum)

Imported from atlas release summary for Polytrichastrum alpinum.

607
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 164 11 POD (61) View species results
Terpenoid pathway 137 17 BAHD (50) View species results
Alkaloid pathway 115 16 NMT (17) View species results
Rosmarinic acid pathway 83 7 C4H (37) View species results
Flavonoid pathway 78 7 UFGT (24) View species results
Steroid pathway 30 12 CAS (8) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 735 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 103 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: IFS
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Gene Pathway Family Confidence Status
Palpscaffold_10009080 Flavonoid IFS low borderline
Palpscaffold_10019720 Flavonoid IFS medium borderline
Palpscaffold_10019780 Flavonoid IFS medium borderline
Palpscaffold_10020330 Flavonoid IFS low borderline
Palpscaffold_10026260 Flavonoid IFS low borderline
Palpscaffold_20034920 Flavonoid IFS low borderline
Palpscaffold_20036380 Flavonoid IFS medium borderline
Palpscaffold_20036760 Flavonoid IFS low borderline
Palpscaffold_20040940 Flavonoid IFS medium borderline
Palpscaffold_20044950 Flavonoid IFS medium borderline
Palpscaffold_20045010 Flavonoid IFS low borderline
Palpscaffold_20045080 Flavonoid IFS medium borderline
Palpscaffold_20045130 Flavonoid IFS low borderline
Palpscaffold_20045410 Flavonoid IFS medium borderline
Palpscaffold_20045420 Flavonoid IFS low borderline
Palpscaffold_20045720 Flavonoid IFS medium borderline
Palpscaffold_20052930 Flavonoid IFS medium borderline
Palpscaffold_30057880 Flavonoid IFS low borderline
Palpscaffold_30058720 Flavonoid IFS medium borderline
Palpscaffold_30062750 Flavonoid IFS medium borderline
Palpscaffold_30066170 Flavonoid IFS low borderline
Palpscaffold_30066180 Flavonoid IFS low borderline
Palpscaffold_30069530 Flavonoid IFS medium borderline
Palpscaffold_30069620 Flavonoid IFS medium borderline
Palpscaffold_30077920 Flavonoid IFS medium borderline
Palpscaffold_40080120 Flavonoid IFS low borderline
Palpscaffold_40099680 Flavonoid IFS medium borderline
Palpscaffold_50104910 Flavonoid IFS medium borderline
Palpscaffold_50106570 Flavonoid IFS medium borderline
Palpscaffold_50111520 Flavonoid IFS low borderline
Palpscaffold_50119120 Flavonoid IFS medium borderline
Palpscaffold_50124200 Flavonoid IFS low borderline
Palpscaffold_50125290 Flavonoid IFS medium borderline
Palpscaffold_50131190 Flavonoid IFS low borderline
Palpscaffold_50135090 Flavonoid IFS medium borderline
Palpscaffold_50136420 Flavonoid IFS low borderline
Palpscaffold_50139500 Flavonoid IFS low borderline
Palpscaffold_60158340 Flavonoid IFS low borderline
Palpscaffold_60158350 Flavonoid IFS low borderline
Palpscaffold_60160530 Flavonoid IFS medium borderline
Palpscaffold_60166020 Flavonoid IFS medium borderline
Palpscaffold_60166030 Flavonoid IFS low borderline
Palpscaffold_60167990 Flavonoid IFS medium borderline
Palpscaffold_60168130 Flavonoid IFS medium borderline
Palpscaffold_60173130 Flavonoid IFS low borderline
Palpscaffold_60173330 Flavonoid IFS low borderline
Palpscaffold_60173860 Flavonoid IFS low borderline
Palpscaffold_60175950 Flavonoid IFS medium borderline
Palpscaffold_60175970 Flavonoid IFS medium borderline
Palpscaffold_60175980 Flavonoid IFS medium borderline