PlantSME Plant secondary metabolism enzyme database

Polytrichastrum alpinum (polytrichastrum_alpinum)

Imported from atlas release summary for Polytrichastrum alpinum.

607
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 164 11 POD (61) View species results
Terpenoid pathway 137 17 BAHD (50) View species results
Alkaloid pathway 115 16 NMT (17) View species results
Rosmarinic acid pathway 83 7 C4H (37) View species results
Flavonoid pathway 78 7 UFGT (24) View species results
Steroid pathway 30 12 CAS (8) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 735 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 103 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: T3O
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Gene Pathway Family Confidence Status
Palpscaffold_10019720 Alkaloid T3O medium borderline
Palpscaffold_10019780 Alkaloid T3O medium borderline
Palpscaffold_10020330 Alkaloid T3O medium pass
Palpscaffold_20036760 Alkaloid T3O medium pass
Palpscaffold_20043640 Alkaloid T3O medium borderline
Palpscaffold_20045080 Alkaloid T3O medium borderline
Palpscaffold_20045410 Alkaloid T3O medium borderline
Palpscaffold_20045720 Alkaloid T3O medium borderline
Palpscaffold_30058310 Alkaloid T3O medium borderline
Palpscaffold_30060290 Alkaloid T3O medium borderline
Palpscaffold_30066180 Alkaloid T3O low borderline
Palpscaffold_30069530 Alkaloid T3O medium borderline
Palpscaffold_40079920 Alkaloid T3O medium pass
Palpscaffold_40080120 Alkaloid T3O medium pass
Palpscaffold_40080430 Alkaloid T3O medium borderline
Palpscaffold_40082710 Alkaloid T3O medium borderline
Palpscaffold_40089420 Alkaloid T3O medium borderline
Palpscaffold_40089440 Alkaloid T3O medium borderline
Palpscaffold_40089450 Alkaloid T3O medium borderline
Palpscaffold_40099790 Alkaloid T3O medium borderline
Palpscaffold_40101330 Alkaloid T3O medium pass
Palpscaffold_50116970 Alkaloid T3O medium borderline
Palpscaffold_50119120 Alkaloid T3O medium borderline
Palpscaffold_50131240 Alkaloid T3O low borderline
Palpscaffold_50135090 Alkaloid T3O medium borderline
Palpscaffold_50136420 Alkaloid T3O medium pass
Palpscaffold_50138460 Alkaloid T3O medium borderline
Palpscaffold_60149810 Alkaloid T3O medium borderline
Palpscaffold_60151020 Alkaloid T3O low borderline
Palpscaffold_60160380 Alkaloid T3O medium pass
Palpscaffold_60160390 Alkaloid T3O medium pass
Palpscaffold_60160530 Alkaloid T3O medium borderline
Palpscaffold_60166020 Alkaloid T3O medium borderline
Palpscaffold_60168130 Alkaloid T3O medium borderline
Palpscaffold_60170320 Alkaloid T3O medium borderline
Palpscaffold_60170470 Alkaloid T3O medium pass
Palpscaffold_60173330 Alkaloid T3O medium pass
Palpscaffold_60175950 Alkaloid T3O medium borderline
Palpscaffold_60175970 Alkaloid T3O medium borderline
Palpscaffold_60175980 Alkaloid T3O medium borderline
Palpscaffold_60175990 Alkaloid T3O medium borderline
Palpscaffold_70181710 Alkaloid T3O medium pass
Palpscaffold_70181730 Alkaloid T3O medium pass
Palpscaffold_70192480 Alkaloid T3O medium borderline
Palpscaffold_70202810 Alkaloid T3O medium borderline
Palpscaffold_70204640 Alkaloid T3O low borderline
Palpscaffold_70209000 Alkaloid T3O low borderline
Palpscaffold_70212060 Alkaloid T3O medium borderline