PlantSME Plant secondary metabolism enzyme database

Polytrichastrum alpinum (polytrichastrum_alpinum)

Imported from atlas release summary for Polytrichastrum alpinum.

607
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 164 11 POD (61) View species results
Terpenoid pathway 137 17 BAHD (50) View species results
Alkaloid pathway 115 16 NMT (17) View species results
Rosmarinic acid pathway 83 7 C4H (37) View species results
Flavonoid pathway 78 7 UFGT (24) View species results
Steroid pathway 30 12 CAS (8) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 735 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 103 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: BR6OX2/CYP85A2
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Gene Pathway Family Confidence Status
Palpscaffold_10019720 Steroid BR6OX2/CYP85A2 low borderline
Palpscaffold_20034920 Steroid BR6OX2/CYP85A2 low borderline
Palpscaffold_20038160 Steroid BR6OX2/CYP85A2 low borderline
Palpscaffold_20045120 Steroid BR6OX2/CYP85A2 low borderline
Palpscaffold_30058310 Steroid BR6OX2/CYP85A2 low borderline
Palpscaffold_30061940 Steroid BR6OX2/CYP85A2 low borderline
Palpscaffold_30062100 Steroid BR6OX2/CYP85A2 low borderline
Palpscaffold_30066890 Steroid BR6OX2/CYP85A2 low borderline
Palpscaffold_30069530 Steroid BR6OX2/CYP85A2 low borderline
Palpscaffold_40079920 Steroid BR6OX2/CYP85A2 medium borderline
Palpscaffold_40080420 Steroid BR6OX2/CYP85A2 low borderline
Palpscaffold_40080740 Steroid BR6OX2/CYP85A2 medium borderline
Palpscaffold_40082710 Steroid BR6OX2/CYP85A2 low borderline
Palpscaffold_40091080 Steroid BR6OX2/CYP85A2 low borderline
Palpscaffold_40096220 Steroid BR6OX2/CYP85A2 low borderline
Palpscaffold_40099790 Steroid BR6OX2/CYP85A2 low borderline
Palpscaffold_40101360 Steroid BR6OX2/CYP85A2 low borderline
Palpscaffold_50119120 Steroid BR6OX2/CYP85A2 low borderline
Palpscaffold_50125290 Steroid BR6OX2/CYP85A2 low borderline
Palpscaffold_60150710 Steroid BR6OX2/CYP85A2 low borderline
Palpscaffold_60150720 Steroid BR6OX2/CYP85A2 low borderline
Palpscaffold_60150930 Steroid BR6OX2/CYP85A2 low borderline
Palpscaffold_60150940 Steroid BR6OX2/CYP85A2 low borderline
Palpscaffold_60151020 Steroid BR6OX2/CYP85A2 low borderline
Palpscaffold_60160530 Steroid BR6OX2/CYP85A2 low borderline
Palpscaffold_60168860 Steroid BR6OX2/CYP85A2 low borderline
Palpscaffold_60172570 Steroid BR6OX2/CYP85A2 low borderline
Palpscaffold_60173120 Steroid BR6OX2/CYP85A2 low borderline
Palpscaffold_60175970 Steroid BR6OX2/CYP85A2 low borderline
Palpscaffold_60175980 Steroid BR6OX2/CYP85A2 low borderline
Palpscaffold_60175990 Steroid BR6OX2/CYP85A2 low borderline
Palpscaffold_70189450 Steroid BR6OX2/CYP85A2 low borderline
Palpscaffold_70192130 Steroid BR6OX2/CYP85A2 low borderline
Palpscaffold_70192480 Steroid BR6OX2/CYP85A2 low borderline
Palpscaffold_70202870 Steroid BR6OX2/CYP85A2 low borderline
Palpscaffold_70204640 Steroid BR6OX2/CYP85A2 low borderline