PlantSME Plant secondary metabolism enzyme database

Polytrichastrum alpinum (polytrichastrum_alpinum)

Imported from atlas release summary for Polytrichastrum alpinum.

607
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 164 11 POD (61) View species results
Terpenoid pathway 137 17 BAHD (50) View species results
Alkaloid pathway 115 16 NMT (17) View species results
Rosmarinic acid pathway 83 7 C4H (37) View species results
Flavonoid pathway 78 7 UFGT (24) View species results
Steroid pathway 30 12 CAS (8) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 735 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 103 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: C4H
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Gene Pathway Family Confidence Status
Palpscaffold_110029060 Flavonoid C4H low borderline
Palpscaffold_20034050 Flavonoid C4H low borderline
Palpscaffold_30058750 Flavonoid C4H low borderline
Palpscaffold_50103770 Flavonoid C4H low borderline
Palpscaffold_60150710 Flavonoid C4H medium borderline
Palpscaffold_60150720 Flavonoid C4H medium borderline
Palpscaffold_60150930 Flavonoid C4H medium borderline
Palpscaffold_60150940 Flavonoid C4H medium borderline
Palpscaffold_60151920 Flavonoid C4H low borderline
Palpscaffold_60154590 Flavonoid C4H low borderline
Palpscaffold_60160380 Flavonoid C4H low borderline
Palpscaffold_60168860 Flavonoid C4H medium borderline
Palpscaffold_80222530 Flavonoid C4H low borderline
Palpscaffold_10009080 Rosmarinic Acid C4H low borderline
Palpscaffold_10019030 Rosmarinic Acid C4H low borderline
Palpscaffold_10019720 Rosmarinic Acid C4H medium pass
Palpscaffold_10019780 Rosmarinic Acid C4H medium pass
Palpscaffold_10020330 Rosmarinic Acid C4H low borderline
Palpscaffold_10021010 Rosmarinic Acid C4H low borderline
Palpscaffold_10022410 Rosmarinic Acid C4H low borderline
Palpscaffold_10022420 Rosmarinic Acid C4H low borderline
Palpscaffold_10022550 Rosmarinic Acid C4H low borderline
Palpscaffold_110029060 Rosmarinic Acid C4H low borderline
Palpscaffold_20034050 Rosmarinic Acid C4H low borderline
Palpscaffold_20034920 Rosmarinic Acid C4H low borderline
Palpscaffold_20035800 Rosmarinic Acid C4H medium pass
Palpscaffold_20036380 Rosmarinic Acid C4H low borderline
Palpscaffold_20038160 Rosmarinic Acid C4H low borderline
Palpscaffold_20040940 Rosmarinic Acid C4H medium pass
Palpscaffold_20043640 Rosmarinic Acid C4H low borderline
Palpscaffold_20044950 Rosmarinic Acid C4H low borderline
Palpscaffold_20044970 Rosmarinic Acid C4H low borderline
Palpscaffold_20045010 Rosmarinic Acid C4H low borderline
Palpscaffold_20045080 Rosmarinic Acid C4H medium pass
Palpscaffold_20045120 Rosmarinic Acid C4H medium pass
Palpscaffold_20045130 Rosmarinic Acid C4H low borderline
Palpscaffold_20045410 Rosmarinic Acid C4H medium pass
Palpscaffold_20045420 Rosmarinic Acid C4H low borderline
Palpscaffold_20045720 Rosmarinic Acid C4H medium pass
Palpscaffold_20052930 Rosmarinic Acid C4H low borderline
Palpscaffold_30057880 Rosmarinic Acid C4H low borderline
Palpscaffold_30058310 Rosmarinic Acid C4H medium pass
Palpscaffold_30058720 Rosmarinic Acid C4H medium pass
Palpscaffold_30058750 Rosmarinic Acid C4H low borderline
Palpscaffold_30060290 Rosmarinic Acid C4H low borderline
Palpscaffold_30061940 Rosmarinic Acid C4H low borderline
Palpscaffold_30062100 Rosmarinic Acid C4H low borderline
Palpscaffold_30062750 Rosmarinic Acid C4H low borderline
Palpscaffold_30066890 Rosmarinic Acid C4H low borderline
Palpscaffold_30069530 Rosmarinic Acid C4H medium pass